Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq5 168 9e-37 >seq5 Length=869209 Score = 168 bits (186), Expect = 9e-37 Identities = 322/469 (69%), Gaps = 13/469 (3%) Strand=Plus/Minus Query 32755 ACATCAG---GACTAAACAGCGTGATATAATCATCGTTTTTCAGACGTTCCCAGAACATT 32811 ||||||| | || |||| |||||||| ||||| || |||| || | | | || Sbjct 711225 ACATCAGAGGGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAGG 711166 Query 32812 TTATTGATTTGGATACCGTAGTCCAAGTGTCTGATTCGATTTTCTTCCACACCCTTGTTG 32871 || | || | || ||||||| || || | || || ||||| ||||| ||| Sbjct 711165 CGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTA 711106 Query 32872 TTCTTGAGCACAAGGATTTTTTCAACTTCAAGATGCCACATCGGATAATACAGAGTAGCA 32931 || || || || || | ||| ||||| |||||||||| || || |||| || || Sbjct 711105 TTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCG 711046 Query 32932 GCGCCACCACGTACACCGCCCTGTGAGCAGCTTTTTACCGCAGTCTGAAAGTATTTCCAG 32991 || |||||||| |||||||| || |||||||||||||| || ||||| || | || | Sbjct 711045 GCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAA 710986 Query 32992 AATGGGATAATACCAGTATGACGAACCTCGCCAGAACGAATT---CTAGAGCCTTCAGCA 33048 || |||||| ||||||||| | |||||| ||| ||| ||| ||| ||| Sbjct 710985 AACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTA---CCTAAAGCG 710929 Query 33049 CGAATAGCACCACCATTGATACCGATACCAGCTCTCTTGCTGATA--TAGTCAACGATAG 33106 |||||| || | || ||||| ||||| || | | ||| || | || | || || | Sbjct 710928 CGAATACGGCCTGCGTTAATACCAATACCTGCGCGC-TGC-GACACGTATTTTACAATGG 710871 Query 33107 AACTAGCGGTTGCGTTAATGCTATCGAGTTCATCACCACTTTCAATCTTGACGCATGAGC 33166 ||| | ||| || || || ||| || ||||||| |||||| ||||| |||| Sbjct 710870 CACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGC 710811 Query 33167 TAAACTGACGGGTCGGAGTACGAACACCAGCCAGAATAGGAGTCGGAAG 33215 | ||||||||||| || ||||| || || | || |||||| ||||| || Sbjct 710810 TGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAG 710762 Score = 87.8 bits (96), Expect = 3e-12 Identities = 171/250 (68%), Gaps = 2/250 (1%) Strand=Plus/Minus Query 31149 ATTACGCATGATATGAGTATAAGAGCGACTGTGAATTGTCTCACTAAAACTCCAAGTCGT 31208 |||||| || ||||| || || ||| |||||||| || |||||||| ||| || Sbjct 712885 ATTACGGATAATATGGGTGTAGCTGCGGCTGTGAATGGTTTCACTAAAGGCCCAGGTTTC 712826 Query 31209 GATCCAAGTCTCAAGCGCAACATCAGAGACGATTGGCAAGAATACCAAGTTTGGTGCGCG 31268 ||||| || || ||| | | ||| || || ||||| | | | ||| || | ||| Sbjct 712825 AATCCAGGTTTCCAGCTCCGGAATAGACACAATCGGCAACAGGGCGACGTTCGGCGAGCG 712766 Query 31269 ACCTTGAACAGAGTCGAGCAGACTTTGATATTTCAGATT-CTGAGTGAACACATATTGTT 31327 ||| || || ||||| ||||| | || ||||||||||| |||| | || | || || || Sbjct 712765 ACCCTGCACTGAGTCCAGCAGCGTCTGGTATTTCAGATTGCTGA-TAAAGATATGTTTTT 712707 Query 31328 CTTGTTCGCTCAATCGAGAGTAATCAATCGCATCCTTAGACAGATCGACTTCCTCTGGTC 31387 | || || ||| | | |||||||| ||| ||| | || | || || || | Sbjct 712706 CATGCTCAGGTAATTGCTGGAAATCAATCCGATCTTTACTGACGTCAATCTCTTCCGGCC 712647 Query 31388 GCCAGAAAAA 31397 |||||||||| Sbjct 712646 GCCAGAAAAA 712637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708690949440960