Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq4 383 8e-102 seq14 223 2e-53 seq22220 113 2e-20 >seq4 Length=924746 Score = 383 bits (424), Expect = 8e-102 Identities = 638/917 (70%), Gaps = 15/917 (2%) Strand=Plus/Plus Query 66100 GCCCTGGCCGAGGTCGATAAACGCTTCGGCGCCGGATCGGCTATGAAGCTGGGTGACAAG 66159 || |||||| || |||| |||| |||||| || |||| ||| || || ||| || Sbjct 25877 GCGCTGGCCCAGATCGAGAAACAGTTCGGCAAGGGCTCGGTCATGCGCCTCGGCGACCAG 25936 Query 66160 CCACAGACTGTGGACGTC------ATTCCCACCGGCTCTATCGCCCTGGACGGCGCTCTG 66213 || | || | | | || ||| |||| ||||| | | |||||| ||| ||| Sbjct 25937 CCTGACACGGGCGCCATCCCGGCCATTTCCACAGGCTCGCTGGGGCTGGACATCGCCCTG 25996 Query 66214 GGCATCGGGGGGTACCCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGG 66273 |||||||| || || | |||||| | || || ||||||||||| || || || || Sbjct 25997 GGCATCGGCGGCCTGCCCAAGGGCCGCATCGTCGAGATCTACGGCCCCGAGTCCTCGGGC 26056 Query 66274 AAGTCAACTCTGTGTCTCCACGCGGTGGCCAA-TGCGCAGAAGGCCGGTGGCAACGCCGC 66332 ||| | || ||| || || | | ||| ||| ||| |||||||||| ||||| Sbjct 26057 AAGACCACGCTGACCCTGCAGGTCATCGCCGCCTGC-CAGCGCGCCGGTGGCACGGCCGC 26115 Query 66333 CTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGC--GCTCGGTGTGGAC 66390 || | ||||||| ||||| | ||||| || |||||| ||| |||||| || | Sbjct 26116 CTTCGTCGACGCCGAGCATGCGCTGGATCCGCTCTACGCC--GGCAAGCTCGGCGTCAAT 26173 Query 66391 CTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGAC 66450 |||| |||| ||||| ||||||||||| ||||||||||| ||||| ||| ||| Sbjct 26174 GTCGAGGACCTGCTGGTGTCGCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCACCGAC 26233 Query 66451 CTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTG 66510 | || || || |||| | | |||| |||| || ||||| || || || || | Sbjct 26234 ATGCTGGTGCGCTCGGGCGCGGTCGACATCATCGTTGTCGACTCCGTCGCCGCGCTCACG 26293 Query 66511 CCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTC 66570 ||||||||||| |||| || || || || |||| ||||||||||| || || |||||| Sbjct 26294 CCGCGCGCCGAAATCGAGGGTGAAATGGGCGACATGCACGTCGGCCTCCAGGCTCGCCTC 26353 Query 66571 ATGTCGCAGGCCATGCGCAAGCTCACCGGCACCATCTCCAGCACCAACACGCTGACGCTC 66630 ||||||||||| |||||||| ||||||||| |||| | ||||| ||| || Sbjct 26354 ATGTCGCAGGCGCTGCGCAAGATCACCGGCAACATCAAGCGTTCCAACTGCCTGGTCATC 26413 Query 66631 TGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACC 66690 | |||||||| | ||| |||||||||| | || | | |||| || |||||| Sbjct 26414 TTCATCAACCAGATCCGCATGAAGATCGGCGTCATGTTCGGCAACCCG---GAAACCACC 26470 Query 66691 ACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCC 66750 || |||||||| || | | |||||||||||| || ||| | || |||| ||||||| | Sbjct 26471 ACCGGCGGCAACGCGCTCAAGTTCTACGCCTCGGTGCGCCTCGACATCCGACGCATCGGC 26530 Query 66751 ACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAAC 66810 | | ||||||||||| || | ||||| ||||| || ||||| ||||||||| Sbjct 26531 GCGGTCAAGGAAGGCGAAGAAGTGGTCGGTTCGGAAACCCGCGTCAAGGTGGTCAAGAAC 26590 Query 66811 AAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 66870 ||| || | |||||| | | | ||||||||| || | ||||| |||||||| Sbjct 26591 AAGGTGTCGCCGCCGTTCAGGGAGGCCGAGTTCCAGATCCTCTACGGCCAGGGCATCAAC 26650 Query 66871 CGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCC 66930 || ||| ||| || ||||||||| |||| || || ||||| | ||||| |||||| Sbjct 26651 CGCCAGGGCGAGATCGTCGACCTGGGCGTGAAGCTCGGTCTGGTCGACAAGTCCGGCGCC 26710 Query 66931 TGGTTCAAGTACGGGGACAAGAACGTCGCTCAGGGCAAGCCCAAGGCCGTCCAGTGGCTC 66990 |||| | ||| || ||| || ||| ||||||||| ||| ||| | ||| || Sbjct 26711 TGGTACGCCTACCAGGGCAACAAGATCGGGCAGGGCAAGGGCAATGCCTGCAAGTTCCTG 26770 Query 66991 AAGGCCAACCCGGACAT 67007 || |||||||| || Sbjct 26771 CTGGAGAACCCGGATAT 26787 >seq14 Length=669857 Score = 223 bits (246), Expect = 2e-53 Identities = 467/693 (67%), Gaps = 15/693 (2%) Strand=Plus/Plus Query 66184 ACCGGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTG 66243 || ||||| | | ||| ||| ||| ||||| ||||| || | |||| |||||| | Sbjct 599849 ACAGGCTCGCTTGGCCTCGACATCGCGCTGGGGATCGGCGGATTGCCGAAGGGCCGCATC 599908 Query 66244 GTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCC 66303 || ||||||||||| || ||| || || ||| | || ||| || || | ||||||| Sbjct 599909 GTCGAAATCTACGGGCCGGAAAGCTCCGGTAAGACCACGCTGACGCTGCATGTGGTGGCC 599968 Query 66304 AATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCT 66363 | | |||||| ||||| | ||||| | | || || || || | |||||||| Sbjct 599969 GAAGAGCAGAAAAAGGGTGGTGTCTGCGCCTTCGTAGATGCCGAACATGCGCTGGACCCG 600028 Query 66364 GAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACT 66423 || || ||| ||||| |||| || | || || | ||||| |||||| Sbjct 600029 ATCTATGCGCGTAAGCTGGGTGTCAACCTTGATGAACTGCTGATCAGCCAGCCCGACACT 600088 Query 66424 GGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCGTC 66483 ||||| ||||| || || |||||||| || || || || | || | |||| Sbjct 600089 GGCGAACAGGCGCTTGAAATCGTTGATACGCTGGTGCGTTCGGGTGCCGTGAGCCTCGTG 600148 Query 66484 GTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGAC 66543 || || ||||| || || || ||| ||| ||||| ||||||||||||| || ||| Sbjct 600149 GTGGTCGACTCGGTCGCTGCGCTGACCCCGAAATCCGAGATCGAAGGCGACATGGGCGAC 600208 Query 66544 AGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGGCACC 66603 | |||||| || || || || ||| ||||||||||||||||| || | | | Sbjct 600209 GCTACTGTCGGCGCCCAGGCCCGACTGATGAGCCAGGCCATGCGCAAGCTGACGGCCTCG 600268 Query 66604 ATCTCCAGCACCAA---CACGCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGC 66660 ||| | || | || || | | | ||| |||||||| | || |||||||||| Sbjct 600269 ATCGGCCGCTCGAATTGCATGGTCA---TCTTCATCAACCAGATCCGGATGAAGATCGGC 600325 Query 66661 AACGTG---GGCTACGGCCCGAACGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTAC 66717 || ||| || |||||| |||||||| || ||| | || ||| ||||| Sbjct 600326 GTGATGTTTGGCAAC--CCCGAA----ACCACCACCGGTGGCCATGCGCTGAAATTCTAT 600379 Query 66718 GCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTC 66777 ||| ||||| |||| | |||||||||| | || ||||| |||| |||| || Sbjct 600380 GCCAGCGTCCGTCTGGACATTCGTCGCATCGGCTCCATCAAGGATCGCGACGAGGTGGTT 600439 Query 66778 GGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGCTGGCCCCGCCGCACCGCAACGCC 66837 |||||| ||||| ||||||||||| ||||||||| ||||||||||| | | | | Sbjct 600440 GGCAACTCGACCCGCGTGAAGGTCGTGAAGAACAAGGTGGCCCCGCCGTTCAAACAGGTC 600499 Query 66838 GAGTTCTCCGTCGTGTACGGGGAGGGCATCTCG 66870 || ||| || |||| || |||||||||||| Sbjct 600500 GAATTCGATATCATGTATGGCGAGGGCATCTCG 600532 >seq22220 Length=23789 Score = 113 bits (124), Expect = 2e-20 Identities = 200/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 64564 TGACTGAACTCAAAGACACCAACCCCAAGGACGCCGTAGGCACTGCCA-AGGTCCCGTAC 64622 || ||||||| |||||||||||||| || |||||| | |||| |||| | || | | | Sbjct 17756 TGGCTGAACTGAAAGACACCAACCCGAAAGACGCCATCGGCA--GCCAGAAGTTGCCT-C 17812 Query 64623 TCCAC--GATCCCCGCTCGGGTGGTCGCCGAGGTCGGCCTGGCAATGATGGAAGGCGCCC 64680 | ||| | || | | | ||| || | |||||| ||||||| || || | Sbjct 17813 TGCACCTGTGGCCAACGACCGCGACCGCGATGGGCTGCCTGGGGCTGATGGATGGTGCTC 17872 Query 64681 TGAAGTACGGCCGCCACAACTACCGCGTCTCCGGTGTCCGCGCTTCGGTCTACTACGACG 64740 ||||||| ||||| ||| | ||| | || || || || ||| |||||| ||| | Sbjct 17873 TGAAGTATGGCCGGGCCAATTGGCGCAAGGCTGGGGTGCGGGCCTCGATCTACTTCGATG 17932 Query 64741 CCGCCAAGCGCCACCTGGACGCCTGGTGGGAGGGTCAGGATATCGACCCCGACAGCGGCC 64800 ||||||| || ||||| | || |||| |||||| |||| |||||| |||||||| | Sbjct 17933 CCGCCAACCGGCACCTTGCTGCGTGGTTCGAGGGTGAGGAGGCCGACCCGGACAGCGGGC 17992 Query 64801 TGCCGCACCTCGTGAAAGCCATCGCCTGCCTTGTGGTCGTCCGCGAC 64847 |||||||||| | | | || | || ||||| | | || || |||| Sbjct 17993 TGCCGCACCTGGCGCATGCGCTGGCGTGCCTGGCGATCATCGTCGAC 18039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243371427041916