Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023717.1 Length=151924 Score E Sequences producing significant alignments: (Bits) Value seq5 161 1e-34 seq100896 147 2e-30 >seq5 Length=869209 Score = 161 bits (178), Expect = 1e-34 Identities = 265/380 (70%), Gaps = 4/380 (1%) Strand=Plus/Minus Query 121982 CATGATGTCGTCAAAGACGATCGACGGGTCTGCCAGGATGTTGCGGATGATGTGGGTGTA 122041 ||| || ||||| |||| | ||| || || ||| || ||||| || |||||||| Sbjct 712924 CATAATATCGTCGAAGATCTTATGCGGTTCAGCACTGATATTACGGATAATATGGGTGTA 712865 Query 122042 CGAACGAGAGTGAATAGTCTCACTGAACGCCCAAGTCTCCACCCAAGTTTCCAGGGTGGT 122101 || |||||| || ||||| || ||||| || || | ||| |||||||| | Sbjct 712864 GCTGCGGCTGTGAATGGTTTCACTAAAGGCCCAGGTTTCAATCCAGGTTTCCAGCTCCGG 712805 Query 122102 GTCGGATACGATCGGCAGAAGAACTGCGTTCGGGCCACGGCCCTGTACAGAGTCCAGAAG 122161 || || ||||||| || | ||||||| || ||||| || |||||||| || Sbjct 712804 AATAGACACAATCGGCAACAGGGCGACGTTCGGCGAGCGACCCTGCACTGAGTCCAGCAG 712745 Query 122162 GATCTGATACTTCAGGTTGCTGATGAAGATGTGCTTCTCGTGATCCGGAAGATTCATGTA 122221 |||| || ||||| |||||||| ||||| || || || || || || | | | | | Sbjct 712744 CGTCTGGTATTTCAGATTGCTGATAAAGATATGTTTTTCATGCTCAGGTAATTGCTGGAA 712685 Query 122222 GTCAATTCGGTCACGGGTCACGTTCACCTCTTCCGGACGCCAGAAGAATGCCAGTTGCTT 122281 ||||| || || | |||| | ||||||||| |||||||| || ||| ||||| Sbjct 712684 ATCAATCCGATCTTTACTGACGTCAATCTCTTCCGGCCGCCAGAAAAAGCTCAGCTGCTT 712625 Query 122282 TTCGATCAGCTTTTCGAACTTAGCGTGTTTTTGCTGGTCATAACGAGAAACGTT--CGGC 122339 ||||||||||||||| || | | | |||||||| |||||||| || ||||| |||| Sbjct 712624 TTCGATCAGCTTTTCAAAAATCGGATACTTTTGCTGATCATAACGGGAGACGTTTACGGC 712565 Query 122340 GTCTCACCGAGGAACATCGG 122359 | ||| | ||||||||| Sbjct 712564 --ATTACCAAAGAACATCGG 712547 Score = 138 bits (152), Expect = 1e-27 Identities = 541/832 (65%), Gaps = 49/832 (6%) Strand=Plus/Minus Query 122849 CGAGGCGGCTCGAACCCGTTCGTTGAGTTGGTGATCTGACTTGACGTCTCGCACGGCATC 122908 || |||||||||| || || || | || | |||||| ||| ||||| | |||||| Sbjct 712059 CGCGGCGGCTCGATACCATTAGTCGCATTCGAGATCTGCGATGAGGTCTCAGATGGCATC 712000 Query 122909 ATGGTTGACAGCGTAGAGTTACGCAGGCCAT------GGATAGCGATTTGAGAGCGAAGC 122962 | | ||| | ||| |||||||||||||||| | ||| | || | || ||| Sbjct 711999 AGCGCTGATAACGTTGAGTTACGCAGGCCATACTGCTGAATATC---TTTA---CGCAGC 711946 Query 122963 CATTCCCAATCCATCT-TCAG--TTCAGCGGTGTGGAGATTATCCACTTCCTTTTTGTAA 123019 |||||||||| | | || |||||| | ||||||| |||||||| || Sbjct 711945 TGCTCCCAATCCAGTTGTAAGGCTTCAGCACAA---ACCTTATCCAGATCCTTTTTATAG 711889 Query 123020 CGGTCAATAGGCAGAATGCCTTGGGAGTATGAGGTTTGGTCATACAGCTTACACTTCCCA 123079 ||||| |||||||| || || | || | ||||| || | || | ||| || Sbjct 711888 GTATCAATCGGCAGAATACCCTGCGCATAAGTGGTTTCGTTAAACTTCGGACAAGGGCCT 711829 Query 123080 AGTTCCTTCGCCAGATCCATCGACGCTTCCAGCAGGTAGAACTGGAATGCTTCTGCCAGT 123139 |||||| |||||| | || ||| |||| |||||| ||| |||| | |||||| | || Sbjct 711828 TGTTCCTGCGCCAGTTTCACCGAGGCTTTCAGCAGATAGTACTGCATTGCTTC-GAAGGT 711770 Query 123140 TCG-TGAACC---GCATTCGCAGCACGAGG-ATCACTGTACTTCAGTCCACGCTTCGCCA 123194 || || | ||||| || |||| ||| ||| || | ||| ||||||||| Sbjct 711769 ACGGTGGGTCAGGGCATTGGC----CGAGCCATCCGAGTATTTGACGCCATGCTTCGCCA 711714 Query 123195 AGTAATACGCCAGGTTGGTCCAGCCAATACCCAGCGTTCGACGATCCTTAGT--CTTCTC 123252 ||| || || ||| || ||||| ||||| || ||||| || ||| || | Sbjct 711713 GGTAGTAGGCGTAGTTAATCACACCAATGCCCAGAGTACGACGCGCCATAGAACCTGATT 711654 Query 123253 T-GCCGCCAGTACCGGGTAGTTCTGGTAGTCCAACAGACGGTCAAGTGAGCGCACC---- 123307 || ||| | | ||||| | ||| || |||| ||| | || |||| |||||| Sbjct 711653 GAGCAGCCGGAATAGGGTAATCCTGATAATCCAGCAGGCTATCCAGTGCCCGCACCGCTA 711594 Query 123308 AAGGTGCGTACCGGGCCACGGAGGTCTTCCAGACTCTCTACCTTGCCGAGGTTGATTGCA 123367 || ||| | ||| || | || ||||| || | ||||||||| | || Sbjct 711593 AATCTGCC-AGCGGTTCA---AACTCGTCCAGCTGTTCAATGGCGCCGAGGTTAAAGGCT 711538 Query 123368 GACAGCGTACAAAGTGCAATCTCGCCATCGTCCTCAGGATTTTTGAGGTCATTGATCGCG 123427 ||||| || || || |||||||| || | |||| || | | | | || Sbjct 711537 GACAGTGTGCAGAGCGCAATCTCACCGTTT------GGATCATTAACATGCTCCAGCGGT 711484 Query 123428 TGAGTAGGCAGGGCAATCTCCATGCACAGGTTGGACTGTTTCACCGGGGCCAGTTCTGGA 123487 | || |||| ||||| |||| ||||||||| || ||||| ||||| | || Sbjct 711483 TTGGTCGGCAACGCAATTTCCAGACACAGGTTGCTTTGCCGTACCGGTGCCAGCGCCGGG 711424 Query 123488 TTGAACGGGCTGTTGGTGTTGCAGTGGTCAACGTGCTGAATGTAGATGCGTCCTGT-CTG 123546 || |||||||||| || |||||||| || |||| || | ||| ||||| || || ||| Sbjct 711423 TTAAACGGGCTGTGCGTATTGCAGTGATCGACGTTTTGCAGGTAAATGCGGCCGGTACTG 711364 Query 123547 ACTGCGCTCCTGCATAGCCACGGAGAAGGCTTCTGCTGCGGAGATGCTTTTCTTA-GCCA 123605 | ||||||||||||| | || ||| ||| |||| |||| || ||| | Sbjct 711363 GC-GCGCTCCTGCATAAATAAGGTAAAGAGTTCGACTGCCTTAATGCGCTTTTTACGGAT 711305 Query 123606 CTTCCGGATCGGCTTCCAACTTCTCGTACAACTCTTCAAATTTCTTCTGGTC 123657 ||| | | || ||||| ||||| | || || ||||||| || | ||| || Sbjct 711304 CTTGCTG-TCAGCTTCATACTTCACATATAAGGCTTCAAACTTTTCCTGATC 711254 Score = 91.5 bits (100), Expect = 1e-13 Identities = 342/525 (65%), Gaps = 25/525 (5%) Strand=Plus/Minus Query 121349 ATCAACCTGACCGGACAGATATTGTCCGTTCTCAGTTTCCTGTGGCGTCACCTGCACATT 121408 ||||| ||| || |||||| | | |||||| |||||| |||| |||||||||||| Sbjct 713587 ATCAATCTGGCCCACCAGATAGGAGCTGATCTCAGATTCCTGCGGCGCCACCTGCACATT 713528 Query 121409 ACTGGTGCTCAAGTGGCTGTTGATCCACGGAATCGGGTTCTTGGTCGGCTTGCCGATCAG 121468 | || | | |||||||||||||| ||||| | ||| | | || | | | Sbjct 713527 GTCAGACACCAGCCAGGTATTGATCCACGGAATGGGGTTTTGGGTGG--TAGCAAAGC-G 713471 Query 121469 TTCACCCAGACCAACTGCTCGCATACGCAGGTCTGTGATGTAGTCGATGTATCCGTC-CA 121527 | | || || || |||| || | || || || || | || | | | || Sbjct 713470 TGGTTTTAAGCCGACCGCCTGCATTCGGCTATTGGTAATATACTCAACATA-CTGACACA 713412 Query 121528 GCATCCCCTTGTTCAGACCGATCATGGAACCATCTTTGAACAGGAAG-CTGCCCCAATCC 121586 | || | |||||||| || ||||| || |||||||| ||||| || |||||| | ||| Sbjct 713411 GAATATCTTTGTTCAGGCCAATCATCGAGCCATCTTTAAACAGATAGGCTGCCC-AGTCC 713353 Query 121587 TTCTCCTGCACAGAGGCGTCGATAAAGCCCTGTCGT--GCTTCCTCGTAGCAGTCCTCCG 121644 || || ||| | | ||| |||||| || ||| | |||||| | ||| || | | Sbjct 713352 TTTTCTTGCTCCGCCGCGCGCATAAAGA--TGGCGTAAGATTCCTCTTCGCACTCTTTGG 713295 Query 121645 CAACACGAGCAAACAGGTCCC---CTTCGTTACCATTTTGCATTTCTCTCAGCATATACT 121701 ||| || || ||| | || | ||| | || ||||||||| || Sbjct 713294 CAATTTCCGC---CATTTCCGGATCATCATCACCGCTGGCCAGAATATTCAGCATATGCT 713238 Query 121702 GAGTTCCTGACAAATGCAAGGCTTCATCACGAGCAATTAACTCGATGATGTTGGTATTGC 121761 |||| || | | || | |||||||| || ||||| | | ||| || || | ||| | Sbjct 713237 GAGTGCCGGTGAGGTGTAGCGCTTCATCGCGGGCAATCAGCCGGATAATCTTAGCATTCC 713178 Query 121762 CCAGCATAACCCCACGCTCACCGAAAGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGA 121821 | ||| | | |||||||| | ||||| || |||||||||||| || || ||||||| Sbjct 713177 CTTCCATCAGCTCACGCTCAGCAAAAGCAAAACTGCAGGCAAAGCTGACATAAAAGCGGA 713118 Query 121822 TAGCTTCGAGTGCGTT----GATATTGTGCAGGCACAGGTACAGC 121862 | ||||| | | |||| || ||| | ||||||||| ||| Sbjct 713117 TCGCTTCTAATACGTTTACCGACATT----AAGCACAGGTAAAGC 713077 >seq100896 Length=2131 Score = 147 bits (162), Expect = 2e-30 Identities = 238/340 (70%), Gaps = 2/340 (1%) Strand=Plus/Minus Query 122021 GTTGCGGATGATGTGGGTGTACGAACGAGAGTGAATAGTCTCACTGAACGCCCAAGTCTC 122080 ||| || || ||||| ||||| ||||| ||||| || |||||||||||||| || || Sbjct 913 GTTACGAATAATGTGCGTGTATGAACGGCTATGAATGGTTTCACTGAACGCCCATGTTTC 854 Query 122081 CACCCAAGTTTCCAGGGTGGTGTCGGATACGATCGGCAGAAGAACTGCGTTCGGGCCACG 122140 | ||||||||| | | || || || || | | | |||| || ||| Sbjct 853 AATCCAAGTTTCTAACTCAGGAATAGACACAATAGGTAATAACGCAACGTTAGGTGAACG 794 Query 122141 GCCCTGTACAGAGTCCAGAAGGATCTGATACTTCAGGTTGCTGATGAAGATGTGCTTCTC 122200 ||| |||||| || ||||| | ||||| || | ||| || | || |||||||| || Sbjct 793 GCCTTGTACACTATCAAGAAGCGTTTGATATTTTAAGTTACTTAAAAATATGTGCTTTTC 734 Query 122201 GTGATCCGGAAGATTCATGTA-GTCAATTCGGTCACGGGTCACGTTCACCTCTTCCGGAC 122259 ||| || || | | | || | ||||| ||||| | || | || ||||| |||| Sbjct 733 GTGTTCTGGTA-ACGCTTGGAAGTCAAGACGGTCTTTACTTACATCAACTTCTTCAGGAC 675 Query 122260 GCCAGAAGAATGCCAGTTGCTTTTCGATCAGCTTTTCGAACTTAGCGTGTTTTTGCTGGT 122319 |||| ||||| | |||||||||||||| ||||||||||| ||| || ||||| |||| Sbjct 674 GCCAAAAGAACGAAAGTTGCTTTTCGATTAGCTTTTCGAAGATAGGGTACTTTTGTTGGT 615 Query 122320 CATAACGAGAAACGTTCGGCGTCTCACCGAGGAACATCGG 122359 | ||||| || ||||| ||| | |||| |||||||| Sbjct 614 CGTAACGTGACACGTTTACCGTTTGGCCGAAAAACATCGG 575 Score = 102 bits (112), Expect = 8e-17 Identities = 203/296 (69%), Gaps = 6/296 (2%) Strand=Plus/Minus Query 121536 TTGTTCAGACCGATCATGGAACCATCTTTGAACAGGAAG-CTGCCCCAATCCTTCTCCTG 121594 ||||| ||||| ||||| |||||||| ||||||||| | |||||| |||| || || || Sbjct 1431 TTGTTAAGACCAATCATAGAACCATCCTTGAACAGGTATTCTGCCC-AATCTTTTTCTTG 1373 Query 121595 CACAGAGGCGTCGATAAAGCCCTGTCGTGCTTCCTCGTAGCAGTCCTCCGCAACACGAGC 121654 | | || || | ||| ||| |||||| || || | | ||||| || Sbjct 1372 TTCTGCTGCTTCAACAAACATCTGAATTGCTTCTTCACGACACTGTGCTGCAACGATTGC 1313 Query 121655 AAA--CAGGTCCCCTTCGTTACCATTTTGCATTTCTCTCAGCATATACTGAGTTCCTGAC 121712 | | || | || ||||| | |||||| ||| || | ||| || || || Sbjct 1312 CATTTCTGGGTCG--TCTTTACCTTCTTGCATAATGTTCAAGATGTGCTGTGTGCCAGAT 1255 Query 121713 AAATGCAAGGCTTCATCACGAGCAATTAACTCGATGATGTTGGTATTGCCCAGCATAACC 121772 || || || ||||||||||| || |||| || |||||| || | ||| || ||| | Sbjct 1254 AAGTGTAACGCTTCATCACGGGCGATTAGCTTGATGATTTTTGCATTACCTTCCATCAAT 1195 Query 121773 CCACGCTCACCGAAAGCGAAGGAGCAGGCAAAGCTCACGTAGAAGCGGATAGCTTC 121828 |||||||| ||||||| || || || |||||||| || ||||| || || ||||| Sbjct 1194 TCACGCTCAGCGAAAGCAAATGAACAAGCAAAGCTTACATAGAAACGAATCGCTTC 1139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484933801415040