Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023733.1 Length=154573 Score E Sequences producing significant alignments: (Bits) Value seq363 93.3 4e-14 seq119755 82.4 8e-11 seq23689 82.4 8e-11 seq9009 82.4 8e-11 seq1958 82.4 8e-11 >seq363 Length=289854 Score = 93.3 bits (102), Expect = 4e-14 Identities = 123/168 (73%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 114445 CCAAGCCCAA-GCCCTGCCTGTGCGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTAGTC 114503 ||||| ||| | | |||| ||| |||| ||| || || |||| || |||||||| || Sbjct 188649 CCAAGAACAACGGCGTGCCGGTGGGGCC-GGGTCGCGGTTCCGGCGCCGGCTCGCTGGTG 188591 Query 114504 ACCTACGTCATGGGCATCACCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGC 114563 | ||| || ||||||| | || |||||||||||||||||| ||||||||||| Sbjct 188590 GCTTACTCGCTGTTCATCACCGACCTGGATCCGATCAAGTACGACCTGCTGTTCGAGCGC 188531 Query 114564 TTTATCAACCCGGACCGCCCCGACTTCCCCGACATCGACGTCGACTTC 114611 || |||| || || ||| | | |||||| ||||| |||||||| Sbjct 188530 TTCCTCAATCCCGAGCGCGTGTCCATGCCCGACTTCGACATCGACTTC 188483 >seq119755 Length=1488 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 94570 GGGT-TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCC 94628 |||| ||||||||||||||||||||| ||| | ||| |||||||||||||||| |||||| Sbjct 1222 GGGTGTAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCGATCCCC 1281 Query 94629 CG 94630 || Sbjct 1282 CG 1283 >seq23689 Length=21658 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Minus Query 94570 GGGT-TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCC 94628 |||| ||||||||||||||||||||| ||| | ||| |||||||||||||||| |||||| Sbjct 2354 GGGTGTAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCGATCCCC 2295 Query 94629 CG 94630 || Sbjct 2294 CG 2293 >seq9009 Length=66380 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 94570 GGGT-TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCC 94628 |||| ||||||||||||||||||||| ||| | ||| |||||||||||||||| |||||| Sbjct 242 GGGTGTAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCGATCCCC 301 Query 94629 CG 94630 || Sbjct 302 CG 303 >seq1958 Length=163579 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 94570 GGGT-TAGCTCAGTGGTAGAGCGTTCCCTTGGTATGGGAAAGGCCCGGGGTTCAATCCCC 94628 |||| ||||||||||||||||||||| ||| | ||| |||||||||||||||| |||||| Sbjct 136237 GGGTGTAGCTCAGTGGTAGAGCGTTCGCTTTGCATGTGAAAGGCCCGGGGTTCGATCCCC 136296 Query 94629 CG 94630 || Sbjct 136297 CG 136298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493391503608480