Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023734.1 Length=35725 Score E Sequences producing significant alignments: (Bits) Value seq11269 91.5 3e-14 seq93553 84.2 5e-12 >seq11269 Length=54388 Score = 91.5 bits (100), Expect = 3e-14 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 17631 GTTTCTACTGAGAACGCCGACGATTTTGAGAAAAACATGGTATCAATCCGTGCTGAAGAG 17690 || || || ||||||| | | || || ||||| ||||||||| | ||||| ||||||||| Sbjct 17852 GTCTCCACCGAGAACGACAAGGACTTCGAGAACAACATGGTAACCATCCGCGCTGAAGAG 17911 Query 17691 CGCTTGGCACTGGCTGTCTATCGTCCGCAGGCATTTGTTAAAGGTTCGCTAACCG 17745 || |||| | || |||||||| || |||| ||||| | |||||||| |||| Sbjct 17912 CGACTGGCCTTCGCGGTCTATCGGCCTGAGGCGTTTGTCACTGGTTCGCTGACCG 17966 >seq93553 Length=2986 Score = 84.2 bits (92), Expect = 5e-12 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 17652 GATTTTGAGAAAAACATGGTATCAATCCGTGCTGAAGAGCGCTTGGCACTGGCTGTCTAT 17711 || || ||||| ||||||||| | ||||| ||||||||||| |||| | || |||||| Sbjct 2980 GACTTCGAGAACAACATGGTAACCATCCGCGCTGAAGAGCGACTGGCCTTCGCGGTCTAT 2921 Query 17712 CGTCCGCAGGCATTTGTTAAAGGTTCGCTAACCG 17745 || || |||||||||| | |||||||| |||| Sbjct 2920 CGGCCTGAGGCATTTGTCACTGGTTCGCTGACCG 2887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113953980878984