Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq4 131 1e-25 seq68 93.3 3e-14 >seq4 Length=924746 Score = 131 bits (144), Expect = 1e-25 Identities = 141/186 (76%), Gaps = 3/186 (2%) Strand=Plus/Plus Query 94587 GGGCACGTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAG 94646 |||||||||| |||||| ||||| || | |||||||| ||||| |||||||||||||| Sbjct 542434 GGGCACGTTGGCCTTGATCAGGCCGGTGATGACATCCACCGAGGGACGCTGCGTCGCCAG 542493 Query 94647 GACGAGATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAAC 94706 ||||| || |||||||| || ||||||||||||||||||||| | || |||| || Sbjct 542494 CACGAGGTGGATGCCGGCGGCGCGCGCCTTCTGCGCGATGCGGGCGATCAGCTCCTCCAC 542553 Query 94707 CTCTTTCTTGTAGCCACCCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTA 94766 | |||||| | | ||| || | ||| |||| ||| || | | ||||||||| | Sbjct 542554 C---TTCTTGCCGACGATCATGATCATGTCGGCGAATTCGTCGATAATGACCACGATGAA 542610 Query 94767 GGGGAG 94772 || || Sbjct 542611 CGGCAG 542616 >seq68 Length=444459 Score = 93.3 bits (102), Expect = 3e-14 Identities = 237/357 (66%), Gaps = 18/357 (5%) Strand=Plus/Plus Query 94421 CCTCGATCTCCCCATCGGAGACGAACGCGCCCTGTATCCGGATG--GCGCTGCGCGCCCC 94478 |||||| ||| | || || ||||| | ||| || |||||| || |||||| || | Sbjct 286511 CCTCGACCTCTTCGTCCGACACGAAGGGGCCGTGGATCCGGGTGATGCGCTGGCCGTTGC 286570 Query 94479 CACCGGCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAG 94538 | || | | | | ||| ||| |||| ||||| ||||| || |||| |||| Sbjct 286571 C-----CATGTAAAGCATGTCGCCCTGGCCCAGAAGCTGTTCGGCCCCCTGCTCGCCCAG 286625 Query 94539 GATCACCCGGCTATCGGTGAGGGACG----CTGTGGCGAACGACAGCCGCGAGGGCACGT 94594 || ||||| ||| | || | ||| ||| || | ||| | ||| | || Sbjct 286626 AATGGTGCGGCTGTCGATCTTCGAAGTCACCTG----GAAGGAAATCCGGGTGGGGAAGT 286681 Query 94595 TGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGAT 94654 | |||||| ||| || | || || || || |||||||||||||||| || ||| | Sbjct 286682 TCGCCTTGATCGTGCCGGTGATGACGTCGACCGAAGGCCGCTGCGTCGCCATGATGAGGT 286741 Query 94655 GAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCT 94714 | ||||| | || |||||| ||||||| | || ||| ||||| | ||||||| Sbjct 286742 GGATGCCCGAGGCCCGCGCCATCTGCGCAAGACGCTGGATGCAAGCCTCGATCTCTTTCC 286801 Query 94715 TGTAGCCACCCATCATGAGGTCCGCGAGTTCATCCACCACTACCACGATGTAGGGGA 94771 | |||| ||||||| ||||| || | || || || | || ||||| ||||||| Sbjct 286802 CG--GCCA-CCATCATCAGGTCGGCCATCTCGTCGACGATGACGACGATATAGGGGA 286855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339374479965248