Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq12585 109 2e-19 >seq12585 Length=48618 Score = 109 bits (120), Expect = 2e-19 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 49391 TGCCGTTCGTCCACCCGCATGTGGCGCTGATGCCCGACGCGCACGCCGGCAAGGGTTCAT 49450 |||||||| || | ||| ||||| ||||||| |||| |||| || ||||| || Sbjct 44301 TGCCGTTCATCTTCAAGCACCTGGCGGTGATGCCGGACGTGCACCTGGGTAAGGGCTCGA 44242 Query 49451 CGGTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGGCGTGGACA 49510 | |||||| ||| ||||| || ||| ||| | |||||||| || || || ||||| | Sbjct 44241 CCATCGGCAGCGTGATCCCCACGGTCGGCGCGATTATCCCGGCGGCCGTTGGTGTGGATA 44182 Query 49511 TCGGCTGCGGGATGATCGCCGCCCGCACCA 49540 |||| ||||| ||||||||||| ||||||| Sbjct 44181 TCGGTTGCGGCATGATCGCCGCGCGCACCA 44152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193345294987600