Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_023865.1 Length=55098 Score E Sequences producing significant alignments: (Bits) Value seq14312 87.8 6e-13 >seq14312 Length=42616 Score = 87.8 bits (96), Expect = 6e-13 Identities = 220/330 (67%), Gaps = 6/330 (2%) Strand=Plus/Minus Query 8473 CGAGATTAAAGGCCCGAAGCACAATCCAGAGATTGTCCAGATGTGGAAAGACATTAAGCG 8532 |||| | ||||| || | || || || |||||| | ||||||||| ||||| ||||| Sbjct 1460 CGAGGTCAAAGGTCCTGATCATAACCCCGAGATTCTGCAGATGTGGCGCGACATAAAGCG 1401 Query 8533 TGGCGGCATCAAAGATGACGAAACTCCTTGGTGTTCTGCATTTGTTGGAGCAATGCTGGA 8592 |||| ||||| ||||||||||| || ||||| | || || || || || |||| || Sbjct 1400 CAGCGGGATCAAGGATGACGAAACACCCTGGTGCGCGGCGTTCGTGGGGGCTGTGCTTGA 1341 Query 8593 ACGTTCAGGCATTGTTTCATCCCGATTTGAATCAGCAAAATCCTATCTGACATGGGG--A 8650 ||| || ||| || ||| || || || |||||||| ||||| | Sbjct 1340 GCGTGTCGGTATTCGCTCCAGCCGCTTCGAGAGCGCCCGCTCCTATCTCGATTGGGGCCA 1281 Query 8651 AGACCAATCAATGAGCCTATTTATGGTTGTATTGTTGTGTTCACTCGCGACGGTGGTGGT 8710 || | | ||| | ||| || | || || ||||| ||| ||||||||| Sbjct 1280 GCGCCTGGCGTT--GCCGGTCCCTGGCTGCGTGGTGGTCTTCACGCGCTCGGGTGGTGGT 1223 Query 8711 CATGTTGGTTTTGTTGTCGGT-AAGACAGAATCTGGAAATCTACTGGTTCTTGGCGGCAA 8769 ||||| ||||| | || ||| ||| | || || || ||||| || || ||||| Sbjct 1222 CATGTCGGTTTCGCGGTGGGTCGTGAC-TCGGCCGGCAACCTGCTGGTGCTCGGTGGCAA 1164 Query 8770 TCAATCTGATGCTGTCAATATCAAAGCATT 8799 ||| || || || || || ||||| ||||| Sbjct 1163 TCAGTCCGACGCGGTGAACATCAAGGCATT 1134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175814895821920