Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq5 131 2e-25 seq100896 109 6e-19 >seq5 Length=869209 Score = 131 bits (144), Expect = 2e-25 Identities = 279/417 (67%), Gaps = 0/417 (0%) Strand=Plus/Minus Query 139708 ACATCAGATCGTTGATTTGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGC 139767 ||||||| ||| | ||||| || || |||| || | | ||||||||||| || | Sbjct 711173 ACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACAC 711114 Query 139768 CTTTGTTGTTTTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACA 139827 | ||| |||||||| || |||| ||| ||||||| ||||| | || ||| ||| Sbjct 711113 CGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACA 711054 Query 139828 ACGTCGCTGCACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGT 139887 || || ||||||||||| ||||| ||||| || ||| ||| || || |||||||| | Sbjct 711053 GGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAAT 710994 Query 139888 GTTTCCAGAAAGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTT 139947 | || | || || || |||||| || | |||| || || ||| ||| Sbjct 710993 GCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTA 710934 Query 139948 CAGCTCGGATTCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTACTTGACAA 140007 ||| || || || |||||||| || || || || || || | || | ||| || |||| Sbjct 710933 AAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAA 710874 Query 140008 TCGATGCTGCTGAGTCGTTGATACTGTTAAGCGAATCATCAGACTCGATAACAACACACG 140067 | | | | | | ||||| | || ||| || |||| || | || || | Sbjct 710873 TGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGG 710814 Query 140068 AACTGAATTGACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCAATGAAA 140124 | ||||| ||||| | || ||||| | || | ||||||||| || |||| ||||| Sbjct 710813 AGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAA 710757 >seq100896 Length=2131 Score = 109 bits (120), Expect = 6e-19 Identities = 202/290 (70%), Gaps = 16/290 (6%) Strand=Plus/Minus Query 138053 AACGTTGCGCATGATGTGGGTGTAAGAACGAGAGTGAATGGTCTCAGAGAATGTCCAAGT 138112 |||||| || || ||||| ||||| ||||| |||||||| ||| ||| | ||| || Sbjct 916 AACGTTACGAATAATGTGCGTGTATGAACGGCTATGAATGGTTTCACTGAACGCCCATGT 857 Query 138113 CTGAATCCATGTTTC-AAGTCCAACAT---CAGAACAGATATCAGCGAATGCGATAGCAG 138168 | |||||| ||||| || || || || || || || | || | || ||| Sbjct 856 TTCAATCCAAGTTTCTAACTCAGGAATAGACACAATAGGTAATAACGCAA-CGTTAG--- 801 Query 138169 GTGCTCGTCCTTGAACTGAATCAAGGAGTGTTTGATATTTCAAGTTGTTGGTGAAAAT-- 138226 ||| || ||||| || |||||| || ||||||||||| ||||| | | ||||| Sbjct 800 GTGAACGGCCTTGTACACTATCAAGAAGCGTTTGATATTTTAAGTTACT--TAAAAATAT 743 Query 138227 --GCCTTGATCGTTTTCAGACATTTTCTGGAATTGAACACGATCTTTGGATACGTCTACT 138284 || || |||| ||| | | ||||| | || ||| ||||| ||| || ||| Sbjct 742 GTGCTTT--TCGTGTTCTGGTAACGCTTGGAAGTCAAGACGGTCTTTACTTACATCAACT 685 Query 138285 TCTTCTGGACGCCAAAAGAAGGAGAGTTGCTTTTCAGTCAACTTTTCAAA 138334 ||||| |||||||||||||| || ||||||||||| | | |||||| || Sbjct 684 TCTTCAGGACGCCAAAAGAACGAAAGTTGCTTTTCGATTAGCTTTTCGAA 635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533917594186560