Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024330.1 Length=37380 Score E Sequences producing significant alignments: (Bits) Value seq11269 154 4e-33 >seq11269 Length=54388 Score = 154 bits (170), Expect = 4e-33 Identities = 158/201 (79%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 17919 TGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGA 17978 |||||||||||||||||||||||||||||||||||| |||||||||||||||| || | | Sbjct 10031 TGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACA 9972 Query 17979 AAGCTGGCATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTGATG 18037 |||| || |||||||||| | ||||||||| |||||||||| ||| | || | Sbjct 9971 AAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTTC 9913 Query 18038 CGCTATTACCTGAGCGAGGACGTCA-AGGAGGGCTACCGTCCCGCGCCGTATACCGTCCA 18096 ||| | |||||| |||| || |||| | || ||| || |||| || ||||| || || Sbjct 9912 CGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTCA 9854 Query 18097 GTTCGCCCTGGAGTGCCTGGC 18117 ||| | || || |||||||| Sbjct 9853 ATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119238645836944