Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq5 150 2e-31 seq51 145 7e-30 seq100896 105 6e-18 seq5373 86.0 6e-12 >seq5 Length=869209 Score = 150 bits (166), Expect = 2e-31 Identities = 224/318 (70%), Gaps = 0/318 (0%) Strand=Plus/Minus Query 118922 GATGTTACGGATGATATGGGTGTATGAGCGAGAGTGGATAGTCTCACTGAACGCCCAAGT 118981 ||| |||||||| ||||||||||| ||| ||| || || ||||| || ||||| || Sbjct 712888 GATATTACGGATAATATGGGTGTAGCTGCGGCTGTGAATGGTTTCACTAAAGGCCCAGGT 712829 Query 118982 CTCTACCCATGTTTCCAGGGTTGTGTCGGACACGATCGGGAGCAGAACTGCGTTCGGCCC 119041 || | ||| |||||||| | ||||| ||||| | ||| | |||||||| Sbjct 712828 TTCAATCCAGGTTTCCAGCTCCGGAATAGACACAATCGGCAACAGGGCGACGTTCGGCGA 712769 Query 119042 ACGGCCCTGTACAGAATCCAGAAGGATCTGGTACTTCAGGTTGCTGATGAAGATGTGCTT 119101 || ||||| || || ||||| || ||||||| ||||| |||||||| ||||| || || Sbjct 712768 GCGACCCTGCACTGAGTCCAGCAGCGTCTGGTATTTCAGATTGCTGATAAAGATATGTTT 712709 Query 119102 CTCGTGATCCGGCAGATTCATGTAGTCGATACGGTCACGGGTCACGTTAACTTCTTCCGG 119161 || || || || | | | | | || || || || | |||| || |||||||| Sbjct 712708 TTCATGCTCAGGTAATTGCTGGAAATCAATCCGATCTTTACTGACGTCAATCTCTTCCGG 712649 Query 119162 ACGCCAGAAGAACGCCAGTTGCTTCTCGATCAGCTTCTCGAACTTGGCGTGTTTCTGCTG 119221 |||||||| || ||| ||||| ||||||||||| || || | | | || ||||| Sbjct 712648 CCGCCAGAAAAAGCTCAGCTGCTTTTCGATCAGCTTTTCAAAAATCGGATACTTTTGCTG 712589 Query 119222 GTCATAGCGAGAAACGTT 119239 ||||| || || ||||| Sbjct 712588 ATCATAACGGGAGACGTT 712571 Score = 147 bits (162), Expect = 2e-30 Identities = 479/726 (66%), Gaps = 35/726 (5%) Strand=Plus/Minus Query 119928 CGAGGTGGCTCAAAACCGTTCGTGGAGTTGGTAATCTGACTGGACGTCTCGCAAGGCATC 119987 || || ||||| | ||| || || | || | ||||| || ||||| | |||||| Sbjct 712059 CGCGGCGGCTCGATACCATTAGTCGCATTCGAGATCTGCGATGAGGTCTCAGATGGCATC 712000 Query 119988 ATCGTGGACAGCGTAGAGTTACGCAGTCCATGAATAGCGA-TGTCGATACGCAGCTTTTC 120046 | || || | ||| ||||||||||| |||| | | || | || ||||||||| || Sbjct 711999 AGCGCTGATAACGTTGAGTTACGCAGGCCAT-ACTGCTGAATATCTTTACGCAGCTGCTC 711941 Query 120047 CCAATCCATCT-TCAG--TTCCGCAGTGTGGAGGCC--ATCTACCTCTTTCTTGTAACGG 120101 |||||||| | | || ||| ||| | || ||| | || || || || Sbjct 711940 CCAATCCAGTTGTAAGGCTTCAGCAC-----AAACCTTATCCAGATCCTTTTTATAGGTA 711886 Query 120102 TCGATCGGCAGAATGCCCTGAGAGTAAGTGGTCTCGTGGAAGAGATCACATTTACCCAAT 120161 || ||||||||||| ||||| | |||||||| |||| || ||| || | Sbjct 711885 TCAATCGGCAGAATACCCTGCGCATAAGTGGTTTCGTTAAACTTCGGACAAGGGCCTTGT 711826 Query 120162 TCTTTTGCCAGGTCAACCGACGCTTCCAGTAGGTAATACTGGAATGCTTCAGCCAGTTCG 120221 || | ||||| | ||||| |||| ||| || || ||||| | |||||| | || || Sbjct 711825 TCCTGCGCCAGTTTCACCGAGGCTTTCAGCAGATAGTACTGCATTGCTTC-GAAGGTACG 711767 Query 120222 T--GAACAGCGTTCGCTGCACGAGGG-TCGCTGTATTTCAGGCCACGCTTCGCCAGGTAG 120278 | ||| | | || |||| || |||||| | |||| |||||||||||||| Sbjct 711766 GTGGGTCAGGG--CATTGGCCGAGCCATCCGAGTATTTGACGCCATGCTTCGCCAGGTAG 711709 Query 120279 TATGCTAAGTTGGTCCAGCCAATACCCAGAGTACGTCGCAGTTTAG--TCT-TCTCTGCC 120335 || || |||| || ||||| ||||||||||| ||| ||| || | || Sbjct 711708 TAGGCGTAGTTAATCACACCAATGCCCAGAGTACGACGCGCCATAGAACCTGATTGAGCA 711649 Query 120336 GCCAGAACCGGATAGTTCTGATAATCTAACAGACGATCCAATGCACGAACCAGTGTA-CG 120394 ||| ||| || || | ||||||||| | ||| | ||||| ||| || ||| | | | Sbjct 711648 GCCGGAATAGGGTAATCCTGATAATCCAGCAGGCTATCCAGTGCCCGCACCGCTAAATCT 711589 Query 120395 GACA--GGCTCACGCATGTCTTCCAGCTTCTCCACCTTGCCGAGGTTGATGGCAGACAGA 120452 | || || ||| | || ||||||| || | ||||||||| | ||| ||||| Sbjct 711588 GCCAGCGGTTCA---AACTCGTCCAGCTGTTCAATGGCGCCGAGGTTAAAGGCTGACAGT 711532 Query 120453 GTACACAGGGCCACTTCCCCCGGGTCGTTCGGGTCATTAATGTCCGTAATCGGATGTGTC 120512 || || || || | || | |||| || ||||||| | | | ||| | ||| Sbjct 711531 GTGCAGAGCGCAATCTCAC------CGTTTGGATCATTAACATGCTCCAGCGGTTTGGTC 711478 Query 120513 GGCAGGGCGATTTCCATGCACAGGTTGGACTGTTTCACCGGGGCCTGTTCGGGGTCGAAC 120572 |||| || ||||||| ||||||||| || ||||| ||| | | |||| ||| Sbjct 711477 GGCAACGCAATTTCCAGACACAGGTTGCTTTGCCGTACCGGTGCCAGCGCCGGGTTAAAC 711418 Query 120573 GGGCTATTAGTGTTGCAGTGGTCAACGTGCTGCACGTAAATACGGCCTGT-CTGAGAACG 120631 ||||| | || |||||||| || |||| |||| |||||| ||||| || ||| | || Sbjct 711417 GGGCTGTGCGTATTGCAGTGATCGACGTTTTGCAGGTAAATGCGGCCGGTACTG-GCGCG 711359 Query 120632 CTCCTG 120637 |||||| Sbjct 711358 CTCCTG 711353 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 121155 TCACCAGACTCAATCAGTACGCAAGAACTAAACTGACGGGTCGGGGTACGAACACCCGCC 121214 |||||| |||||||||||||||| || || ||||||||||| |||||||| || |||| | Sbjct 710838 TCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGAC 710779 Query 121215 ATGATCGGGGTCGGCAAAGACACCTTCATCAGCGA 121249 || || || ||||||| || | ||| | |||||| Sbjct 710778 ATAATAGGTGTCGGCAGTGAAATCTTAAACAGCGA 710744 >seq51 Length=473680 Score = 145 bits (160), Expect = 7e-30 Identities = 213/299 (71%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 111911 TTTGCGATCGCATTAATGGTCAAGTCCCGGCGGGCCAAATCCTCTTCGATGGTCACATCT 111970 || ||||| ||||| ||||||| || |||||||| | ||| | || | |||||||| Sbjct 460395 TTGGCGATAGCATTGATGGTCAGATCGCGGCGGGCGAGATCTTGCTCCAGCGTCACATCA 460336 Query 111971 GG-GCTGAACATCACCTCGAAATCGTGGTATCCTGCGCCAGTTGAACGCTCGGTACGGGC 112029 || || | | | || | || || || || ||||| | ||||||||| ||||| Sbjct 460335 GGCGCCGCATAG-ACGTTAAAGCCGGTATAGCCACTGCCAGCTTTACGCTCGGTGCGGGC 460277 Query 112030 CAGGGCGTACTCTTCCTTGGTCTCAGGATGCAGGTAAACTGGGAATGCGGCACCGACTTG 112089 ||||||||| ||||| ||||| | ||||||||| |||| || || | ||| || || Sbjct 460276 CAGGGCGTATTCTTCTTTGGTTTTCGGATGCAGGAAAACCGGAAAATCTTTACCTACCTG 460217 Query 112090 CTCGAAGCCGAGTGCCATCATCTCTTCGTGGGTGGAGCCGACCACAACGTAGTCACGGTC 112149 || |||| ||| ||| ||||| | || ||| ||| |||||||| |||||||| || Sbjct 460216 CTGATAGCCCAGTTCCAGCATCTGCGCCGGGCTGGCGCCAACCACAACATAGTCACGCTC 460157 Query 112150 TTTGCTCTCAACACCCATCAGTTCATCGCGGACCGCGCCGCCGACCAGATAGATTTTCA 112208 | |||| |||||||||||| ||||||||||| || ||||| |||| || Sbjct 460156 AGTAAAGGGGTAGCCCAGCAGTTCATCGCGCACCGCGCCGCCAACAAGATAAATTTGCA 460098 >seq100896 Length=2131 Score = 105 bits (116), Expect = 6e-18 Identities = 271/408 (66%), Gaps = 15/408 (4%) Strand=Plus/Minus Query 118331 GTTGATCCACGGAATCGGGTTCTTGGTCGGCTTAC---CGATCAGTTCACCCAGGCCAAC 118387 ||||||||||||||| ||||| | ||||| ||| | || | ||||| || Sbjct 1537 GTTGATCCACGGAATAGGGTTACT------CTTACTTTCGAACTGTGTAGGTAGGCCTAC 1484 Query 118388 CGCTCGCATACGCTGGTCGGTGATGTAGTCGATGTAACCGTCCAGCATACCTTTGTTCAG 118447 ||| |||||| | || ||||| || | ||| | | ||| ||||||| || Sbjct 1483 CGCAGTCATACGTGCATTAGTTATGTATTCAACGTATTGGCATAAGATATCTTTGTTAAG 1424 Query 118448 GCCGATCATCGAACCGTCTTTGAACAGGAAG-CTGCCCCAGTCTTTCTCCTGCACCGATG 118506 || ||||| ||||| || ||||||||| | |||||| | ||||| || || | | || Sbjct 1423 ACCAATCATAGAACCATCCTTGAACAGGTATTCTGCCCAA-TCTTTTTCTTGTTCTGCTG 1365 Query 118507 CGTCGATAAAGCCCTGTCGTGCCTCTTCGTAGCAATCTTCTGCCACACGTGCAAA--CAG 118564 | || | ||| ||| ||| ||||| || | | |||| || ||| | | | Sbjct 1364 CTTCAACAAACATCTGAATTGCTTCTTCACGACACTGTGCTGCAACGATTGCCATTTCTG 1305 Query 118565 GTCACCTTCGTTACCGTTCTGCATTTCTTTCAGCATATACTGAGTTCCGGACAAATGCAA 118624 | | || ||||| | ||||| |||| || | ||| || || || || || || Sbjct 1304 GGT--CGTCTTTACCTTCTTGCATAATGTTCAAGATGTGCTGTGTGCCAGATAAGTGTAA 1247 Query 118625 GGCTTCATCACGAGCAATCAGTTCAATAATGTTGGTGTTACCCAGCATTACGCCGCGCTC 118684 ||||||||||| || || || | || || || | ||||| ||| | | ||||| Sbjct 1246 CGCTTCATCACGGGCGATTAGCTTGATGATTTTTGCATTACCTTCCATCAATTCACGCTC 1187 Query 118685 ACCGAAAGCGAAGGAGCAGGCGAAGCTCACGTAGAAACGGATCGCTTC 118732 | ||||||| || || || || ||||| || |||||||| |||||||| Sbjct 1186 AGCGAAAGCAAATGAACAAGCAAAGCTTACATAGAAACGAATCGCTTC 1139 >seq5373 Length=95907 Score = 86.0 bits (94), Expect = 6e-12 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 146725 CGGTGTATAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCTGGTTCGAT 146784 ||| | ||||| ||||||||||| ||| ||||||||||||||| |||||| ||||||| Sbjct 61963 CGGAGCATAGCACAGCCTGGTAGTGCACCTGGTTTGGGACCAGGGGGTCGTAGGTTCGAA 61904 Query 146785 TCCAGCTACACCGACCAAATTATTG 146809 ||| || | ||||||| |||||| Sbjct 61903 TCCTACTGCTCCGACCATTTTATTG 61879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476115313888320