Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024362.1 Length=40472 Score E Sequences producing significant alignments: (Bits) Value seq34826 152 1e-32 >seq34826 Length=13225 Score = 152 bits (168), Expect = 1e-32 Identities = 238/333 (71%), Gaps = 13/333 (4%) Strand=Plus/Minus Query 11053 AGCC-TATCAGGGCGAGCTGCCTTTCTTCGAGAACGAAGATGGCACCGTCACGTTCAAGT 11111 |||| ||||| ||||| ||||| ||| |||| |||| || ||||| || || ||||||| Sbjct 8649 AGCCGTATCAAGGCGACCTGCCCTTCATCGACAACGGTGACGGCACGGTGACCTTCAAGT 8590 Query 11112 TCAGCGGCTATGCCTCGTACAAGGACCAGAAGACTGGCGAGA--ACCGCGACATCGTTCT 11169 || ||||| ||| ||| || | ||| ||||||| | | ||| || || Sbjct 8589 TCGTCGGCTGGGCCAGCTACGAGAAG-----GAC-GGCGAGATGATCCCGA--TCCCCCT 8538 Query 11170 GCGTGTCGTTGACGCCAAGGGCAAGCGCATCGAAGCCGTTCCTGCCATCGCTGGCGGTTC 11229 ||||||||||||||||||||||||| ||||| | || || |||| | || || || Sbjct 8537 GCGTGTCGTTGACGCCAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCGGGTGGCTC 8478 Query 11230 CAAGCTGAAGGTCCGCTTCTCGATCTTCCCGTACACCTTCGGTGCCG-TTGTTGGTGCCA 11288 | || |||||||||||||| ||| |||| ||| | | | ||| || || ||| Sbjct 8477 CGAGGGCAAGGTCCGCTTCTCCATCGTCCCCTACGGC-TGGAACCCGACCGTGGGCGCCT 8419 Query 11289 GCGTGAAACTGCAACTGGACAGCGTGATGCTGATCGAGCTGCGTGAGTTCGCTGCTGGTG 11348 |||||| || |||||||| || | ||||||| | | ||| |||| | || |||| Sbjct 8418 CCGTGAAGCTCCAACTGGAAGGCTTCATGCTGACCAAACTGGTCGAGTCAGATGATGGTC 8359 Query 11349 GTGACGACTGGGCCGGTCAGGAAGAAGAAGGCT 11381 |||||||||| ||| |||||||| || |||| Sbjct 8358 AAGACGACTGGGGCGGCCAGGAAGAGGACGGCT 8326 Score = 129 bits (142), Expect = 2e-25 Identities = 184/255 (72%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 30665 GGGGTCCCCTATGAGTACCTGCACAAGAAGATTTTCATCGAGTCCAGCTTCAACCCTGAC 30724 |||||||| || || |||||||||| | | |||| || ||| ||||||||| | Sbjct 8080 GGGGTCCCTTACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAA 8021 Query 30725 GCCAAGTCCCCAACCGGACCTCTGGGTCTGGGGCAGTTCACCAAGGCAACCGGCAAGGCT 30784 ||| | ||| || || |||| ||| | ||||||||||||||||| || || || || Sbjct 8020 GCCGTGAGCCCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCC 7961 Query 30785 TACGGTCTGATGACCGATGAGGATCGTC-TGGACCCAATCAAGTCCATCAACGCTTCCGC 30843 ||||| ||||| ||||| ||||| | || | ||||| |||||||||| |||| |||| Sbjct 7960 TACGGCCTGATCACCGAGGAGGA-CTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGC 7902 Query 30844 TCAGTACACCCGTG---ACCTAATGGGCACCTACAAGGGCGACATGCTGAAGGTGGCACT 30900 || | ||| || | |||| | || | | ||| |||||| |||||||| | || Sbjct 7901 TCGGCACATGCGCGACAACCTCAAGG---CGTCCAACGGCGACGAGCTGAAGGCGCTCCT 7845 Query 30901 GGCCTACAACCAAGG 30915 | ||||||||||| Sbjct 7844 GATGTACAACCAAGG 7830 Score = 120 bits (132), Expect = 8e-23 Identities = 486/758 (64%), Gaps = 46/758 (6%) Strand=Plus/Minus Query 33101 GAGAACAACAACTTCCTCGAAGCCCGTAACCTGTTCGACTCGGACGTGTCGGTGCCACTG 33160 ||||||||| ||| ||||||||| |||||||| |||||||| || ||||| | ||| | Sbjct 5818 GAGAACAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGAT--CACCG 5761 Query 33161 AG--TGATGGTTCGTCGTTCTCGGTCAATGACCTGCGCATGTATGACTTCACCAAGCT-- 33216 | ||| || | ||||| | || |||||||| || ||||||| | ||| Sbjct 5760 CGCCTGACGGCCAGCCGTTCGCTGTGAATGACCTCCGA------GACTTCAACCTGCTTC 5707 Query 33217 ----GATGCCATCCTATGACCGCCGTATCAACGGTGACGTGGGCATCATGGCTGCGACTG 33272 | | || || |||||| | ||||||||||| | | | |||||| || || | Sbjct 5706 GGGTGGTCCCGCAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCG 5647 Query 33273 GTGAGGGCACCGATGCGCTCAAGGCTCGTGTC--CTGAAGAT--CAA--GACCACCAAGG 33326 | ||| |||| | || ||| ||| | ||| ||| | || || | | Sbjct 5646 GGAAGGACACCCGGACCCTGAAGAACATGGTCAACGGAATGCGCCAAAGGTCCGCCCACG 5587 Query 33327 GCAACAGCTCTGACGTGGAGGC------CCTTGAGTCTGCCGTTAAGCTGCTCACTGGTC 33380 || | | || || |||||| ||| | ||| | ||| ||||||| || | Sbjct 5586 GCGAGGACGCT--CG-GGAGGCTGAATACCTCATGGACGCCCTGAAGATGCTCACCGGAC 5530 Query 33381 GCGCTCGTCGTAACCCAGATGACGCCTTTGGGACTGCTCTGCGATCCCTCAACGACCTGT 33440 ||||||| || | || || | | ||| | ||| | ||||||| | |||||| | Sbjct 5529 GCGCTCGGCGCGATCCTGACGGCACCTGGGCGACCGTAGCGCGATCCTTGAACGACATCG 5470 Query 33441 CCTTCTTCACCAAGAACGCCTACATGGGCGTGCAGAACTTCACCGAGATCG---CCGGGA 33497 || ||| |||||||||||||||||||| |||||| |||||||| || || || Sbjct 5469 GGTTTGCCACGAAGAACGCCTACATGGGCGTACAGAACATCACCGAGGCCGCGTCCCTGA 5410 Query 33498 TGGTGACCAATGGGCATCTTCGGATGCTGATGCACGGTGTGCCTTACCTGCGTGAGATGA 33557 | || ||| || || | |||||| || | || | || || || | Sbjct 5409 TCGT---CAAGGGCCACCAGAAGATGCTCCTGAAGGGCATCCCGATGCTCAAGAAGTGGT 5353 Query 33558 CCACTTGGGGAACCAAGATCAAACCAGAGCAGCTAAAGGAGATGCACAACCTGATCTTCG 33617 |||| || || ||| | | | || | | |||||||||||| ||||||||||| Sbjct 5352 CCACGGCAGGGACAAAGCTGGAGCTGGACGACATCAAGGAGATGCACGGCCTGATCTTCG 5293 Query 33618 GGCGTGAACTGGATGACACCATCCGGCCTCGTCGGGCTGACATCGTGGACCGTCTGCGGA 33677 | || ||||| |||| ||| ||||| ||| |||||||||||| || Sbjct 5292 GCAAGGAGCTGGACGACATCATTCGGCCCACCCGGCAGGACATCGTGGACAACCT----- 5238 Query 33678 CCCAAGGCTCGAACAACTTCGTTGCC---CAGACCGTAGGCTCTGCCAAGTTCGCCACTC 33734 || ||||| | || | ||| |||| || ||| || ||||||||||||| Sbjct 5237 -CCGTCGCTCGGAGAATGGGGCCGCCTCGCAGATCGCAGGGTCCCTCAAGTTCGCCACTG 5179 Query 33735 AGGAACTGGCCGCTCGCAGTCCGTTCACCAAGCTGCTCACTGAGACTTCCAACTACATCG 33794 || | |||||||| |||||||| ||| ||| |||| | |||||||||| Sbjct 5178 GTGAGATCGCCGCTCGGTCCCCGTTCACTTGGCTCCTCCGTGAGTCAGGCAACTACATCA 5119 Query 33795 CTGACGCTGGTCGTCAAGGTGCTCTGATGGACATGATC 33832 ||||| || || ||||| || ||| | ||| | ||| Sbjct 5118 TGGACGCGGGCCGCCAAGGGGCGCTGGTTGACCTCATC 5081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129111868827888