Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024367.1 Length=75028 Score E Sequences producing significant alignments: (Bits) Value seq379 361 3e-95 >seq379 Length=288837 Score = 361 bits (400), Expect = 3e-95 Identities = 612/880 (70%), Gaps = 11/880 (1%) Strand=Plus/Plus Query 45652 CATGAACAAGGCATCAGCCAATCCGGTCACACCCAAGCCTTGGCGACGCTTGAAGCGTGC 45711 ||| | ||||||||| || | |||||||| |||| || ||| |||||| ||| || Sbjct 226469 CATCAGCAAGGCATCCGCGAGGCCGGTCACGCCCAGCCCGATGCGGCGCTTGTTGCGCGC 226528 Query 45712 TTCGT-CTCGTTGTGCTTCCAGAGGGAAGAGGCTGGTTTCAACCACACTGTCCAGAATAC 45770 || | | | || |||||| |||||| |||||| || |||||| |||||| || | Sbjct 226529 CTCAAGCGCCTGCTG-TTCCAGCGGGAAGCGGCTGGCATCCACCACATTGTCCATCATCC 226587 Query 45771 GAACACCAGTCCGTACTGATTCTTCCAGCGCATTCATGTTCATCTCTGCCTGTCCTTTGA 45830 | || | || || ||| |||||||| | | | || ||| | ||| Sbjct 226588 GCACCGAAAGGCGGACCAGTTCGTCCAGCGCGACCGGATCAAGCTTTGCTTTCGGCGTGA 226647 Query 45831 CGAACGGGAAGACGACATGCTTTGCCAGATTCACTGAACCAAGCAGACAGGCACCATACG 45890 || || | | || || | || ||||| || || || ||||| ||||| ||||| | Sbjct 226648 --AAGGGTCTGTCACCA-GCGTCGCAAGATTGACCGACCCCAGCAGGCAGGCGCCATAGG 226704 Query 45891 GAGGCAGAGGCTGCTCACCACATGGATTCGTTGCTGCAATGGTTTCAAGGAACCAGAGAT 45950 | ||||| ||||| || ||||| || || || || || |||||||| | | | |||| Sbjct 226705 GCGGCAGCGGCTGTTCCCCACAGGGGTTGGTGGCGGCGATGGTTTCCACATAACCCAGAT 226764 Query 45951 TGTTCTCCTTGTTGATGCGATCAATGAAGATCACACCGGGTTCAGCGTAGTTGTAGGTGT 46010 ||||| |||||||||||| || |||||||||||||||||||| ||| | | || |||| Sbjct 226765 TGTTCATCTTGTTGATGCGGTCGATGAAGATCACACCGGGTTCCGCGAAATCATAAGTGT 226824 Query 46011 TCCATAGAATCGCTTCCCAGAGATCCTTTGCTTTGATGGTGTCGTAGACCTTACCATCGA 46070 | | | ||| | ||| ||||| || | | |||| |||||||| || |||| Sbjct 226825 TGCGCATGATCTTGTTCCACAGATCGCGCGCCTGAACCGTGTGATAGACCTTGCCGTCGA 226884 Query 46071 ACATCAGATCCCAGTCAGAATCATGAGCC---ACCGCTTCCATGAACTCATCAGTACAGA 46127 | ||| ||||| | ||| |||| || || |||||||| |||| || | Sbjct 226885 ATTGCAGCTCCCAC---GGGCCATCAGCCTTCACGGCATCCATGAAGGCATCGGTGACCA 226941 Query 46128 GCACTGACACGTTGAAGTTACGAAGACGCAGAGGATCCTGCTTGGCTTGGACGAATTCCA 46187 | || |||| |||||| |||| || || || || | |||||| | || ||| || Sbjct 226942 GAACCGACAGGTTGAACATACGCAGGCGGGCCGGGTCTTTCTTGGCCTCGATGAAGGCCT 227001 Query 46188 TGATGTCCGGATGGTCACACCGCATGGTGGCCATCATAGCACCCCGTCGGCTGCCTGCTG 46247 | ||||| ||||| || ||||||||||||||||| || ||||| || || || | Sbjct 227002 CCACATCCGGGTGGTCGCAGCGCATGGTGGCCATCATCGCGCCCCGGCGCGAACCGGCAG 227061 Query 46248 ACATGATGGTTTTGCACATCGAGTCCCAGACATCCATGAATGTGAGAGGACCGCTGGAGA 46307 |||||||||| |||||||| ||||||||||||||||| | || || ||| || Sbjct 227062 ACATGATGGTGCGGCACATCGCATCCCAGACATCCATGAAGCTCAGCGGGCCGGAGGCAT 227121 Query 46308 AGCTCTCCACGCCCTTCACAGGTGCTCCCTTCGGACGAAGGGTACTGAAGTCATAACCAA 46367 | | ||||||||||| || || ||| || | ||| ||| ||||| || | Sbjct 227122 CGGCGGCGACGCCCTTCACCTCGGCCCCGCGCGGGCGGATGGTCGAGAAATCATAGCCGA 227181 Query 46368 TCCCACCGCCTTGCTGCATCGTGAGAGCAGCTTCCTTGAGCATATCGAAGATACCATCAA 46427 |||| ||||| |||||||| || || || |||||||| ||| |||||| || || | Sbjct 227182 TCCCGCCGCCCTGCTGCATGGTCAGCGCGGCTTCCTTCAGCGCATCGAAAATGCCCGACA 227241 Query 46428 GGCTGTCAGGGATGGTTCCCATGACATAGCAGTTGAACAAGGTCACGTTGCGTCCCGTAC 46487 |||||| || | ||| ||||||||| |||||||||||| |||||| |||| || || | Sbjct 227242 TGCTGTCCGGCACGGTGCCCATGACAAAGCAGTTGAACAGCGTCACGCTGCGCCCGGTGC 227301 Query 46488 CTGCACCGGAATTAATCCGTCCTGCTGGTAGGAACTTGAA 46527 | ||||||| ||||||| || || || ||| | ||||| Sbjct 227302 CCGCACCGGCGGTAATCCGCCCGGCGGGCAGGTATTTGAA 227341 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 239437687021244