Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq34866 98.7 3e-16 seq4461 80.6 7e-11 >seq34866 Length=13211 Score = 98.7 bits (108), Expect = 3e-16 Identities = 169/245 (69%), Gaps = 3/245 (1%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 |||||| || ||||| ||||| || ||||| ||||| | | || ||||||||||| Sbjct 5952 ATGGCACGC---GGTGTGAACAAAGTTATCTTGGTTGGTAATTTAGGCCAAGATCCAGAA 5896 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || || ||| | || | ||| | || || || |||| || || ||| | || Sbjct 5895 GTACGTTATATGCCTAATGGCAATGGCGTAGCGAATATCAGCATTGCTACGACAGATAGC 5836 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||| ||||| | || || || ||||| || || |||||||| || || Sbjct 5835 TGGAAAGATAAAAACACAGGGCAAATGCAAGAGCGTACTGAATGGCACCGTGTCGTGTTA 5776 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| || || || ||||||||||| ||||||||||| ||||| || || || || || Sbjct 5775 TTTGGCAAACTAGCAGAAGTTGCTGGTGAATACCTTCGTAAAGGTTCACAAGTGTACATC 5716 Query 38434 GAAGG 38438 ||||| Sbjct 5715 GAAGG 5711 >seq4461 Length=107335 Score = 80.6 bits (88), Expect = 7e-11 Identities = 192/288 (67%), Gaps = 7/288 (2%) Strand=Plus/Minus Query 38206 GGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAGGTGCGCTATCTA 38265 |||||||||||||| || | | || | || || | ||||| || || || ||||| Sbjct 84273 GGTGTAAACAAGGTCATTCTGGTCGGCAATCTGGGGCGTGATCCCGAAGTCCGTTATCTG 84214 Query 38266 CCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTTTGGCGGGATAAG 38325 || ||||||||| || || || |||| | || || ||| |||||||| ||| Sbjct 84213 CCGTCCGGCGGCGCGGTCGCCAATGTCACCGTGGCTACCAGCGAGAGCTGGCGGGACAAG 84154 Query 38326 CAAACCGGACAGCCA--AAAGAGAAAACAGAGTGGCACCGAGTTACTTTGTTTGGGAAGC 38383 | ||||| ||||| | ||| | || || ||||| || || ||| | || | Sbjct 84153 AATACCGG--AGCCATGCAGGAGCAGACGGAATGGCATCGCGTGGTTTTCTACGGTCGCC 84096 Query 38384 TGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATTGAAGGCCAGC 38443 |||| ||| | || || |||||||| || || || || | ||||| | || ||| || Sbjct 84095 TGGCGGAAATCGCCGGTGAATACCTGCGCAAGGGCTCCAAGATTTATCTCGAGGGCTCGC 84036 Query 38444 TTGAAACTAAGAAGTGGCGGG---ATCAAAGCGGTCAGGACCGATACA 38488 | | || ||||||| || | || | ||| |||||||| |||| Sbjct 84035 TGCATACCCGCAAGTGGCAGGACAAGCAGACCGGGCAGGACCGCTACA 83988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132614755509992