Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024451.1 Length=220222 Score E Sequences producing significant alignments: (Bits) Value seq7660 89.7 7e-13 >seq7660 Length=75349 Score = 89.7 bits (98), Expect = 7e-13 Identities = 128/178 (72%), Gaps = 12/178 (7%) Strand=Plus/Plus Query 140436 AATATTGTTCACCGAGACATTAAACTCGGAAACATCATTTATGACACAAAGTTAAAAACT 140495 |||||||| |||||||| | ||||| || || ||| | | || | || |||||| Sbjct 74359 AATATTGTCCACCGAGATCTGAAACTTGGGAATATCGTGTTGGATA---AG---AAAACT 74412 Query 140496 AGTAAA----CTAT--CTAATTTTTGTTTAGGAAAACACCTTTCAAGTGAAAACGATCTT 140549 || ||| |||| | ||||||||||| ||||| | | | || |||||| || ||| Sbjct 74413 AGAAAAATCACTATTGCCAATTTTTGTTTGGGAAAGCTTTTGTTAAATGAAAATGACCTT 74472 Query 140550 TTAAAAGATCAACGCGGGTCTCCCGCATATATTTCTCCGGATGTTATCAGCGGTAAAC 140607 || ||||||||| | || ||| ||||||||| ||| |||||| | | ||||||| Sbjct 74473 TTGAAAGATCAAAGAGGCAGTCCTGCATATATTAGTCCAGATGTTCTTAATGGTAAAC 74530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 702995011081920