Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2234 102 8e-17 >seq2234 Length=154088 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 ||||| |||||||| ||||||||||| || || ||| | || || ||||| || || Sbjct 11162 GTGGATTCTTTCTGGATATTGTAATCAGACAGAGTACGACCA-TCTTCAAGCTGTTTTCC 11104 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || | | ||||||||| |||||||||||||| || || ||| ||| || Sbjct 11103 GGCGAAGATCAATCTCTGCTGGTCTGGAGGGATGCCTTCTTTATCCTGGATTTTTGTTTT 11044 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| | || || || || | || | ||| || || |||||||| Sbjct 11043 GACATTTTCTATTGTGTCGCTAGGTTCAACTTCTAACGTTATGGTCTTCCCTGTCAGAGT 10984 Query 133643 TTTTACGAAAATCTGCAT 133660 |||||||| || ||||| Sbjct 10983 CTTTACGAATATTTGCAT 10966 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGT-GGACGAGTCCTCGAGCTGCTTGCC 133522 ||||| ||||| || ||||||||||| | || | | | || || |||||||| || Sbjct 10934 GTGGATTCTTTTTGGATATTGTAATCTGAAAGAGTACGGCCA-TCTTCAAGCTGCTTTCC 10876 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || | || |||| |||||| || || ||||| || || || || ||||| ||| Sbjct 10875 AGCAAAGATCAGCCTCTGCTGATCTGGTGGGATACCCTCTTTATCTTGAATCTTGGCCTT 10816 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||| | |||||||| || | |||| |||||| || |||||||| Sbjct 10815 CACATTTTCGATTGTGTCACTAGGCTCCACTTCAAGAGTGATGGTTTTTCCAGTCAGAGT 10756 Query 133643 TTTTACGAAAATCTGCAT 133660 || || || |||||||| Sbjct 10755 CTTCACAAAGATCTGCAT 10738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482331677108640