Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024782.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq11269 150 4e-32 >seq11269 Length=54388 Score = 150 bits (166), Expect = 4e-32 Identities = 157/201 (78%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 18792 TGAAACCTGACGCCTCCAGCCACAATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGA 18851 |||| ||||||||||||| ||||||||||||||||| |||||||||||||||| || | | Sbjct 10031 TGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACA 9972 Query 18852 AAGCCGGTATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTGATG 18910 |||| ||| |||||||||| | ||||||||| |||||||||| ||| | || | Sbjct 9971 AAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTTC 9913 Query 18911 CGCTATTACCTGAGCGAGGATGTCA-AAGAGGGCTACCGTCCCGCGCCGTATACCGTCCA 18969 ||| | |||||| |||| || |||| | || ||| || |||| || ||||| || || Sbjct 9912 CGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTCA 9854 Query 18970 GTTCGCCCTGGAGTGCCTGGC 18990 ||| | || || |||||||| Sbjct 9853 ATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117507957977600