Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_024792.1 Length=160281 Score E Sequences producing significant alignments: (Bits) Value seq457 86.0 6e-12 seq172962 84.2 2e-11 seq26979 82.4 8e-11 >seq457 Length=273712 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 132300 TGGACTGAGAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACT 132359 ||| ||||| |||| ||||||| ||||||| |||||||||| || ||||||||||||| Sbjct 147642 TGGCCTGAGCAGGAATCGAACCAGCGACACAAGGATTTTCAGTCCTTTGCTCTACCAACT 147701 Query 132360 GAGCTACCAGTCCAA 132374 |||||| ||| |||| Sbjct 147702 GAGCTATCAGGCCAA 147716 >seq172962 Length=1033 Score = 84.2 bits (92), Expect = 2e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 132308 GAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACTGAGCTACC 132367 || ||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 732 GACGGAATCGAACCGCCGACACGGGGATTTTCAATCCCCTGCTCTACCAACTGAGCTACC 791 Query 132368 AGTCCA 132373 | ||| Sbjct 792 CGGCCA 797 >seq26979 Length=17813 Score = 82.4 bits (90), Expect = 8e-11 Identities = 54/60 (90%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 132308 GAAGGATTCGAACCTCCGACACAGGGATTTTCAGCCCCCTGCTCTACCAACTGAGCTACC 132367 || ||| ||||||| ||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 17611 GACGGAATCGAACCGCCGACACGGGGATTTTCAATCCCCTGCTCTACCAACTGAGCTACC 17670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511615952124960