Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_025115.1
Length=40002
Score E
Sequences producing significant alignments: (Bits) Value
seq129201 102 2e-17
seq188 86.0 2e-12
>seq129201
Length=1356
Score = 102 bits (112), Expect = 2e-17
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 18143 CATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGT 18202
|||| || ||||||||| |||||| ||||| ||||| || |||||||||||||||||||
Sbjct 620 CATCGACACCAATGTGCATTTTCATGCCGAAGTGCCATTGATTACCTTTCTTGGTCTGGT 561
Query 18203 GCATCTCGGGGTCGCGCTTGCCGCTGCCATTCTTGGTCGAGCTGGGCGC 18251
|||| || ||||| |||| || ||| |||||||| || || || ||
Sbjct 560 GCATTTCCGGGTCACGCTGACCACTGTTGTTCTTGGTGGAACTCGGAGC 512
>seq188
Length=347077
Score = 86.0 bits (94), Expect = 2e-12
Identities = 111/150 (74%), Gaps = 5/150 (3%)
Strand=Plus/Minus
Query 15749 CACCGTCAC---CGTCACGCAGTACGTGGACCGCGTGCAAACGATCCGCCTCAAGGGCGA 15805
|||||||| |||||| || ||||| |||||||| | | ||| ||||||||
Sbjct 16517 CACCGTCAAGGTCGTCACCCAATACGTCGACCGCGTCCGCGTCGTTCGCGAGAAGGGCGA 16458
Query 15806 CACCATCATCAAGGAGATTCCGCGT-TATGTCCCGATCCAGGCTGATGCTTCCTGCGTTG 15864
||||||||||||||| |||| ||| ||||| || | || || |||||| | ||| |
Sbjct 16457 AACCATCATCAAGGAGGTTCC-CGTCTATGTGCCCGTTCAAGCCGATGCTGCTTGCACTA 16399
Query 15865 TTCCTCGCGGCTTTGTGCGGCTGCACGACG 15894
| || ||||||||||| ||||||||||
Sbjct 16398 TCAACCGTGGCTTTGTGCGCCTGCACGACG 16369
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 127611087842848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |