Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_025115.1 Length=40002 Score E Sequences producing significant alignments: (Bits) Value seq129201 102 2e-17 seq188 86.0 2e-12 >seq129201 Length=1356 Score = 102 bits (112), Expect = 2e-17 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 18143 CATCCACGCCAATGTGCGCTTTCATTCCGAAATGCCACTGGTTACCTTTCTTGGTCTGGT 18202 |||| || ||||||||| |||||| ||||| ||||| || ||||||||||||||||||| Sbjct 620 CATCGACACCAATGTGCATTTTCATGCCGAAGTGCCATTGATTACCTTTCTTGGTCTGGT 561 Query 18203 GCATCTCGGGGTCGCGCTTGCCGCTGCCATTCTTGGTCGAGCTGGGCGC 18251 |||| || ||||| |||| || ||| |||||||| || || || || Sbjct 560 GCATTTCCGGGTCACGCTGACCACTGTTGTTCTTGGTGGAACTCGGAGC 512 >seq188 Length=347077 Score = 86.0 bits (94), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 5/150 (3%) Strand=Plus/Minus Query 15749 CACCGTCAC---CGTCACGCAGTACGTGGACCGCGTGCAAACGATCCGCCTCAAGGGCGA 15805 |||||||| |||||| || ||||| |||||||| | | ||| |||||||| Sbjct 16517 CACCGTCAAGGTCGTCACCCAATACGTCGACCGCGTCCGCGTCGTTCGCGAGAAGGGCGA 16458 Query 15806 CACCATCATCAAGGAGATTCCGCGT-TATGTCCCGATCCAGGCTGATGCTTCCTGCGTTG 15864 ||||||||||||||| |||| ||| ||||| || | || || |||||| | ||| | Sbjct 16457 AACCATCATCAAGGAGGTTCC-CGTCTATGTGCCCGTTCAAGCCGATGCTGCTTGCACTA 16399 Query 15865 TTCCTCGCGGCTTTGTGCGGCTGCACGACG 15894 | || ||||||||||| |||||||||| Sbjct 16398 TCAACCGTGGCTTTGTGCGCCTGCACGACG 16369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127611087842848