Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq1 131 6e-26 >seq1 Length=1655743 Score = 131 bits (144), Expect = 6e-26 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 10738 ACCGCCTCCGAACTGCGCCAGTTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAG 10797 |||||| ||| |||||||||||| |||| || |||||| |||||| || |||||| Sbjct 395911 ACCGCCGACGAGCTGCGCCAGTTCGTCGAACGGATCGAGCATCTGGAGCAGGAAAAGAAG 395852 Query 10798 GACATCGCGGACCAGGTGAAGGAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACC 10857 ||||||||||| ||| | ||||| ||| |||||| |||||| ||||||||||||||| Sbjct 395851 GACATCGCGGAGCAGATCAAGGAAGTCTATGCCGAGTCCAAGGGCCGGGGCTACGACACC 395792 Query 10858 AAGGTCATGCGCAAGATCATCGCAGAGCGCAAGCGCAGCCGCGACGACATCAACGAGGAG 10917 | | |||||| ||||| | ||||||| | ||| | | |||||| Sbjct 395791 ACCGCTCTGCGCACCGTCATCTCTTTGCGCAAGAAGGACAAGGACCAGCTTGCCGAGGAA 395732 Query 10918 GAAGCCGTCCTCGAACTGTACCGCTCGGCGCTGGGGATGTCGTGATG 10964 ||||| || || || | ||| || |||||||||||| | ||||| Sbjct 395731 GAAGCGGTGCTGGAGATCTACAAGTCTGCGCTGGGGATGGCCTGATG 395685 Score = 118 bits (130), Expect = 4e-22 Identities = 118/153 (77%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 10738 ACCGCCTCCGAACTGCGCCAGTTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAG 10797 |||||| ||||||||||||||| |||| || |||||| |||||| || |||||| Sbjct 68808 ACCGCCGACGAACTGCGCCAGTTTGTCGAACGGATCGAGCATCTGGAGCAGGAAAAGAAG 68749 Query 10798 GACATCGCGGACCAGGTGAAGGAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACC 10857 |||||||| || ||| | ||||| ||| ||||||||||||| |||||||| |||||| Sbjct 68748 GACATCGCCGAACAGATCAAGGAAGTCTATGCCGAGGCCAAGGGCCGGGGCTATGACACC 68689 Query 10858 AAGGTCATGCGCAAGATCATCGCAGAGCGCAAG 10890 |||| |||| |||||| | ||||||| Sbjct 68688 AAGGCGCTGCGGTCGATCATTTCCATGCGCAAG 68656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190193654919016