Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq5 118 1e-21 >seq5 Length=869209 Score = 118 bits (130), Expect = 1e-21 Identities = 293/441 (66%), Gaps = 9/441 (2%) Strand=Plus/Minus Query 142129 GTTATCAACGAATTGTGGATAAATTCGAGCAGTACCAGAGCGTTCAGTCATGAACAATTC 142188 || ||| ||| ||| | ||||| || | |||| | ||| || ||| || || Sbjct 711400 GTGATCGACGTTTTGCAGGTAAATGCGGCCGGTACTGGCGCGCTCCTGCATAAATAAGGT 711341 Query 142189 AAAGAGTTCTAGTGCTTTGATTCTTTTCTTTCTGATTGTTGGGTCTTTTTCAGCTTTCTC 142248 ||||||||| | ||| || || | || || | ||| | ||| |||| ||| | Sbjct 711340 AAAGAGTTCGACTGCCTTAATGCGCTTTTTACGGATCTTGCTGTCAGCTTCATACTTCAC 711281 Query 142249 ATAAA--GCT-CACGGAATTTATCTTGATCTTCAAAGAACGAGTAGTATAGTTCGCCTGA 142305 ||| | ||| || || || || |||||||||||||| | | || || || | Sbjct 711280 ATATAAGGCTTCA---AACTTTTCCTGATCTTCAAAGAAGGCATCATACAGC---CCCGG 711227 Query 142306 CATTTCGTGAGGGCTAAATAAAGTAATATAATCATTTTTACCAAGGCGTTCCATCATAAG 142365 || || ||||| || || || ||||| |||| |||| ||||| | ||| || Sbjct 711226 CACATCAGAGGGGCTGAACAAGGTGATATAGTCATCTTTAATCAGGCGCTGATACATCAG 711167 Query 142366 GTCATTAATCTGAATTCCGTAGTCCATATGTCTAATACGGTTTTCATCCACGCCTTTGTT 142425 | |||| ||| | || ||||||| ||| || | ||||| || || || || ||| Sbjct 711166 GCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTT 711107 Query 142426 ATTTTTCAGAACCAACAGGTTCTCTACTTCTAAGTGCCACATCGGATAATACGCTGTAGC 142485 ||||||||| |||| ||| || ||||| | ||||||| || || || || || Sbjct 711106 ATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGC 711047 Query 142486 AGCACCACCACGAATACCACCTTGAGAACAAGATTTTACTGCAGTTTGGAAATGTTTCCA 142545 ||||||||||| | ||| ||||| || || ||||||||| || |||||||| || | Sbjct 711046 GGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATA 710987 Query 142546 GAATGGAATAACACCCGTATG 142566 || || ||| || ||||| Sbjct 710986 AAACGGGATACAGCCAGTATG 710966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539651846032320