Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq5 116 4e-21 >seq5 Length=869209 Score = 116 bits (128), Expect = 4e-21 Identities = 286/429 (67%), Gaps = 6/429 (1%) Strand=Plus/Minus Query 26854 AACCAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTC--GATGCGACGTTCG 26911 || |||||||| | |||||| |||||| | ||| | || ||||| ||||| | | | Sbjct 711187 AATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGC--CTTACC 711130 Query 26912 CGGTTCTCTTCTGTTCCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAG-TG 26970 |||||||||||| || ||||| || ||||| || | | | || ||| || || Sbjct 711129 CGGTTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCA-GCGATTCCACTTCCAGATG 711071 Query 26971 CCACAGAGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTT 27030 ||||| ||| | || || || ||||| || || | ||||| || ||||| || Sbjct 711070 CCACAAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTT 711011 Query 27031 GAGCGCCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCGCC 27090 | || || || ||| |||||||| ||| ||||||| || || Sbjct 711010 TACTGCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATT 710951 Query 27091 GCGAATAGGACTACCAATACCACGGATTGCCCCGAAGTCAAAACCGATACCAGCGCGTTT 27150 || || || ||||| | | | || || || || || ||| ||||| ||||| | Sbjct 710950 ACGGATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTG 710891 Query 27151 GGACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGT 27210 ||||| || | || |||| ||| || || ||||| || |||||| |||||||| Sbjct 710890 CGACACGTATTTTACAATGGCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACA 710831 Query 27211 CTTGATCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGG 27270 || |||| || || ||||||||||||||||| || ||||| || || | ||| || || Sbjct 710830 CTCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGG 710771 Query 27271 GGTTGGAAG 27279 || || || Sbjct 710770 TGTCGGCAG 710762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495859530711360