Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_025458.1 Length=43510 Score E Sequences producing significant alignments: (Bits) Value seq112276 91.5 4e-14 >seq112276 Length=1639 Score = 91.5 bits (100), Expect = 4e-14 Identities = 203/300 (68%), Gaps = 6/300 (2%) Strand=Plus/Minus Query 41118 TAAGCAATATTCTTTATCATCATGTAAACGCAGACCGCGGCCAATGATTTGTTGAAACAA 41177 |||||| | || ||| | || |||||| || || || || | ||||||||| | || Sbjct 1205 TAAGCAGTCTTTTTTTCCTTCGCTTAAACGAAGGCCTCGACCCACTATTTGTTGATATAA 1146 Query 41178 ACTAGCCGATTCAGTGGCGCGCATGATCACCACGTAATCAACGTGTGGAGCATCAAAACC 41237 ||| | ||||| |||| || | ||| | | ||||||||||| || |||||||| || Sbjct 1145 ACTGACAGATTCGGTGGGCCGTAAAATCGCAATATAATCAACGTGAGGGGCATCAAAGCC 1086 Query 41238 TGTAGTCAAAATGTCAACGTTAACAATGTA-TTTATAGCCTTGAACCTTAAACCGTTCAA 41296 || || | | | || ||||| | || ||||| ||| | ||||| | | || Sbjct 1085 CGTCGTGAGTACGGATACATTAACCAAATACTTTATTTTTTTG-GCTTTAAATTGATTAA 1027 Query 41297 TTTTATCATCACGCTCTTTTTTCTTAAGCTTGCCGGTGATCACTTC--TACTTCACCAGC 41354 | | ||||||||| || || | | | |||||||| | | | |||| ||| | Sbjct 1026 TAATTCGATCACGCTCGTTATTATCAGTATCACCGGTGATAAGTGCCGTACT--ACCCTC 969 Query 41355 AGGTAAGTAGCTTGCTATTTCCTCAGCATGGCTAATGGTGGCAGCAAATATCATCACGCC 41414 ||||||||||| | ||||| | ||||| | | ||| ||||| || |||||||| || Sbjct 968 AGGTAAGTAGCCAGTAATTTCTTTGGCATGCATCACGGTTGCAGCGAAGATCATCACACC 909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138812661663104