Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq21230 167 1e-36 seq11470 167 1e-36 >seq21230 Length=25512 Score = 167 bits (184), Expect = 1e-36 Identities = 221/306 (72%), Gaps = 2/306 (1%) Strand=Plus/Minus Query 19894 TGGGTTTGATCAGATTGAGTGGGTTATTAATGAGATTAAAACAAACCCAACATCACGAAG 19953 ||| || ||||| || | ||| |||| ||||| || || || || || | ||||| | Sbjct 8840 TGGCTTCGATCAAATCAAATGGCTTATCAATGAAATCAAGACCAATCCCAATTCACGTCG 8781 Query 19954 ATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCA 20013 |||| || || |||||||| ||| |||| | | | || | ||||| |||||||| Sbjct 8780 TCTAATCGTTTCTGGTTGGAACCCTAATGAAGCAGGTAAAGTGGCATTACCGCCTTGCCA 8721 Query 20014 TACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAG 20073 ||| | || |||||||| || |||| |||| | || ||||| |||||||||| || Sbjct 8720 TACGTTGTTCCAATTCTTCGTACAAGACAATAAACTCTCATGCCAACTGTATCAACGCAG 8661 Query 20074 TGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACTT 20133 |||||| |||| || |||||||||||||||||||| |||||| ||||||| || | Sbjct 8660 TGCTGATGTATTCCTAGGTGTTCCATTTAATATTGCGAGTTATGCCCTACTTACGCATAT 8601 Query 20134 AGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTTGGTGGTGATTGCCA 20193 |||| || |||||| | ||||||||| ||||| ||| || || ||| || Sbjct 8600 GATTGCGCAAGTATGTGGTTTGGGTGTTGGTGACTTTGTCTGGACAGGCGGCGAT--ACA 8543 Query 20194 CATTTA 20199 |||||| Sbjct 8542 CATTTA 8537 >seq11470 Length=53368 Score = 167 bits (184), Expect = 1e-36 Identities = 214/295 (73%), Gaps = 0/295 (0%) Strand=Plus/Minus Query 19894 TGGGTTTGATCAGATTGAGTGGGTTATTAATGAGATTAAAACAAACCCAACATCACGAAG 19953 ||| ||||| || ||| | ||| | | ||||| || ||||| || || | ||||| | Sbjct 34572 TGGTTTTGACCAAATTAAATGGCTCGTCAATGAAATCAAAACCAATCCGAATTCACGTCG 34513 Query 19954 ATTAATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCA 20013 ||||| || || || |||||||| |||| | | | || | |||||||||||| || Sbjct 34512 CTTAATCGTTTCGGGCTGGAATCCAAATGAAGCAGGTAAGGTTGCTTTACCACCTTGTCA 34453 Query 20014 TACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAG 20073 ||| || || ||||| |||||| | ||| ||| | |||||||| | |||||||| || Sbjct 34452 TACCCTGTTCCAATTTTTTGTGCATGATAACAAACTCTCTTGCCAACTTTATCAACGTAG 34393 Query 20074 TGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACACACTT 20133 ||| || |||| | ||||| |||||||||||||| ||||| |||| || || | Sbjct 34392 TGCAGATGTATTTTTAGGTGTGCCATTTAATATTGCTAGCTATGCCCTACTCACCCATAT 34333 Query 20134 AGTTGCATTAGAATGTGGGCTTAATGTTGGTGAGTTTGTTTGGGTTGGTGGTGAT 20188 ||||| || ||||| | ||||||| || ||||||||| |||||||||| Sbjct 34332 GATTGCACAAGTCTGTGGTTTAGATGTTGGGGACTTTGTTTGGACTGGTGGTGAT 34278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318310451624036