Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq2234 96.9 3e-15
>seq2234
Length=154088
Score = 96.9 bits (106), Expect = 3e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||||||||||||||| || | | ||||| | || |||| || || || |||||
Sbjct 10700 TCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAG 10641
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| || || || || | ||||| | || |||||| ||||| ||| | | ||
Sbjct 10640 ATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTT 10581
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | || || || | || ||||| | ||||| || || || || | ||||||||||
Sbjct 10580 TCAATGGTATCACTAGGCTCAACCTCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACA 10521
Query 35726 AATATCTGCATTCTGT 35741
|| ||||||||| |||
Sbjct 10520 AAAATCTGCATTTTGT 10505
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580
|||||| || | ||||| ||| || || ||||||||||| || | | || || |
Sbjct 11409 CCTCAAGACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGATAGAGTACGGCC 11350
Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640
|| || || |||||||| ||||| ||||| ||||| ||||| | |||| | || ||
Sbjct 11349 ATCTTCTAGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCTTT 11290
Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700
|| ||| ||| ||| | | || | | |||||||| | ||| || | || ||
Sbjct 11289 ATCTTGGATTTTTGTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTTTCTAAGGTTAT 11230
Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|| || || ||||||||||| |||||||| |||||
Sbjct 11229 GGTCTTCCCTGTCAAAGTTTTGACAAATATTTGCAT 11194
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581
|| || |||| ||| | ||| || ||||||||||| ||||| | || || || |
Sbjct 12092 CTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCA 12033
Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641
|| || || |||||||| ||||| || || |||||||| || | |||| | || |||
Sbjct 12032 TCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTG 11973
Query 35642 TCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700
||| ||| |||||| || | | || | | || || || | ||| || || | || ||
Sbjct 11972 TCCTGGAT-TTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAAT 11914
Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
|||||||| || | ||| || ||||| || |||||
Sbjct 11913 TGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCAT 11878
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
||| ||||| ||||||||||| | || ||| ||| | || || ||||| ||||| |||||
Sbjct 12297 CTCTTTTTGGATGTTGTAATCCGACAGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAA 12238
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663
|||| || ||||| || | |||| || || ||| | ||| ||||| || | |
Sbjct 12237 AATCAGCCTTTGCTGATCTGGTGGAATGC-CTTCTTTATCTTGAATTTTTGTTTTGACAT 12179
Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723
|| | | || ||||| | ||| || || | ||||| || || || || | ||||| |
Sbjct 12178 TTTCAATTGTATCGCTTGGTTCTACTTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAA 12119
Query 35724 CAAATATCTGCAT 35736
|||| || |||||
Sbjct 12118 CAAAAATTTGCAT 12106
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578
||||||| || |||||||| ||| || ||||| ||||||||||| | | || ||
Sbjct 11639 AACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGA 11580
Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638
| || |||| ||||||||| ||||| || | || ||| || || | || | | ||
Sbjct 11579 CCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGGATACCTTCT 11520
Query 35639 TTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGT 35697
|||| | ||| ||| || || | || | | ||||| || | || || |||| ||
Sbjct 11519 TTGT-CTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTACTTCCAAGGT 11461
Query 35698 GATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736
||| ||||| || || | |||||||| || || |||||
Sbjct 11460 GATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCAT 11422
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449777984558880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |