Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2234 96.9 3e-15 >seq2234 Length=154088 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||||||||||||||| || | | ||||| | || |||| || || || ||||| Sbjct 10700 TCCTTTTGAATGTTGTAGTCCGAGAGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAG 10641 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| || || || || | ||||| | || |||||| ||||| ||| | | || Sbjct 10640 ATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTT 10581 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | || || || | || ||||| | ||||| || || || || | |||||||||| Sbjct 10580 TCAATGGTATCACTAGGCTCAACCTCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACA 10521 Query 35726 AATATCTGCATTCTGT 35741 || ||||||||| ||| Sbjct 10520 AAAATCTGCATTTTGT 10505 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 35521 CCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC 35580 |||||| || | ||||| ||| || || ||||||||||| || | | || || | Sbjct 11409 CCTCAAGACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGATAGAGTACGGCC 11350 Query 35581 GTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTT 35640 || || || |||||||| ||||| ||||| ||||| ||||| | |||| | || || Sbjct 11349 ATCTTCTAGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGAATACCTTCTTT 11290 Query 35641 GTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 || ||| ||| ||| | | || | | |||||||| | ||| || | || || Sbjct 11289 ATCTTGGATTTTTGTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTTTCTAAGGTTAT 11230 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || ||||||||||| |||||||| ||||| Sbjct 11229 GGTCTTCCCTGTCAAAGTTTTGACAAATATTTGCAT 11194 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 35522 CTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCG 35581 || || |||| ||| | ||| || ||||||||||| ||||| | || || || | Sbjct 12092 CTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATCCGACAGAGTACGGCCA 12033 Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || || || |||||||| ||||| || || |||||||| || | |||| | || ||| Sbjct 12032 TCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGGGAATTCCTTCTTTG 11973 Query 35642 TCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGAT 35700 ||| ||| |||||| || | | || | | || || || | ||| || || | || || Sbjct 11972 TCCTGGAT-TTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGACTTCTAATGTAAT 11914 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| || | ||| || ||||| || ||||| Sbjct 11913 TGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCAT 11878 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| ||||| ||||||||||| | || ||| ||| | || || ||||| ||||| ||||| Sbjct 12297 CTCTTTTTGGATGTTGTAATCCGACAGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAA 12238 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 |||| || ||||| || | |||| || || ||| | ||| ||||| || | | Sbjct 12237 AATCAGCCTTTGCTGATCTGGTGGAATGC-CTTCTTTATCTTGAATTTTTGTTTTGACAT 12179 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || ||||| | ||| || || | ||||| || || || || | ||||| | Sbjct 12178 TTTCAATTGTATCGCTTGGTTCTACTTCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAA 12119 Query 35724 CAAATATCTGCAT 35736 |||| || ||||| Sbjct 12118 CAAAAATTTGCAT 12106 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGC 35578 ||||||| || |||||||| ||| || ||||| ||||||||||| | | || || Sbjct 11639 AACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAAAGAGTACGA 11580 Query 35579 TCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCC 35638 | || |||| ||||||||| ||||| || | || ||| || || | || | | || Sbjct 11579 CCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGGATACCTTCT 11520 Query 35639 TTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGT 35697 |||| | ||| ||| || || | || | | ||||| || | || || |||| || Sbjct 11519 TTGT-CTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTACTTCCAAGGT 11461 Query 35698 GATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| ||||| || || | |||||||| || || ||||| Sbjct 11460 GATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCAT 11422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449777984558880