Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_026607.2 Length=159914 Score E Sequences producing significant alignments: (Bits) Value seq5 168 7e-37 seq51 104 2e-17 seq76955 87.8 2e-12 >seq5 Length=869209 Score = 168 bits (186), Expect = 7e-37 Identities = 286/408 (70%), Gaps = 10/408 (2%) Strand=Plus/Minus Query 133268 TGCAGACCATAGTCTAGATGACGAATACGGTTTTCATCTACGCCTTTGTTGTTCTTTAAT 133327 |||| |||||||| ||||| | | ||||| || ||||| || ||| || || | | Sbjct 711156 TGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAGT 711097 Query 133328 ACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 133387 |||| ||| ||| || || |||||||||| || || | || || || ||||||||| Sbjct 711096 ACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACCA 711037 Query 133388 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 133447 || ||||||||||| || || ||||||||| ||||| ||||| || | || || || Sbjct 711036 CGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGATA 710977 Query 133448 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 133507 ||||||||| |||||||||||| ||| ||| ||| ||||| || Sbjct 710976 CAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCCT 710917 Query 133508 GCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTTAATAAT---ACTGTTACTTG 133562 ||||| || || ||||| || ||| ||| || | || || | ||| |||| | || Sbjct 710916 GCGTTAATACCAATACCTGCGCGC-TGC-GACACGTATTTTACAATGGCACTG-GAGGTG 710860 Query 133563 CCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGAC 133622 ||||| || |||| ||| || ||| ||||| | ||| || || || ||||||| Sbjct 710859 --GCATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGAC 710802 Query 133623 GAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCT 133670 | || || ||||| | || | |||||| ||||| |||| |||||||| Sbjct 710801 GGGTTGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq51 Length=473680 Score = 104 bits (114), Expect = 2e-17 Identities = 76/87 (87%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 62449 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 62508 |||||||||| |||||||| |||||||||||| | ||||||||||||| |||||||||| Sbjct 469304 TGGTGGCCCCAGCTGGACTCGAACCAGCGACCGATCGATTATGAGTCGAGTGCTCTAACC 469245 Query 62509 -ACTGAGCTAAGGGGCCGTAATTCTAT 62534 ||||||||| |||||| |||| ||| Sbjct 469244 AACTGAGCTATGGGGCCTGAATTGTAT 469218 >seq76955 Length=4939 Score = 87.8 bits (96), Expect = 2e-12 Identities = 74/89 (83%), Gaps = 4/89 (4%) Strand=Plus/Minus Query 62449 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 62508 ||||||||||| | ||||||||| | |||| | ||||||||||||| |||||||||| Sbjct 825 TGGTGGCCCCTCCCAGACTTGAACTGGGGACCTAACGATTATGAGTCGTGTGCTCTAACC 766 Query 62509 -ACTGAGCTAAGGGGCCGTAATTCTATTA 62536 |||||||||||||||| ||| ||||| Sbjct 765 AACTGAGCTAAGGGGCC---ATTGTATTA 740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510444197989440