Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_026608.1 Length=42093 Score E Sequences producing significant alignments: (Bits) Value seq1 178 3e-40 >seq1 Length=1655743 Score = 178 bits (196), Expect = 3e-40 Identities = 315/458 (69%), Gaps = 10/458 (2%) Strand=Plus/Minus Query 38643 TTCCACCTTGACCCGCTTTGGTCTTCGCCGAATATCGACGCTTGCGGTATTGACAACTAT 38702 |||||||| || ||||||||| | || | ||||| ||| || |||||||| Sbjct 146801 TTCCACCTCGATCCGCTTTGGGCCGATCCCGAGATCGATTTCGTCGGGATCGACAACTAC 146742 Query 38703 TTGCCGTTGTCCGATTGGCGCGACGGAACGCAGCACCTTGACTACGACGGGGTTAACGGG 38762 ||||| | ||||| ||||||||||| |||| || ||| | || | | || Sbjct 146741 ATGCCGCTCTCCGACTGGCGCGACGGCTTCGAGCATCTCGACGCGGCCGAAGG---CTGG 146685 Query 38763 CCGGTTTCGCCAT--ACGAACCCGACTACCTGCGGTCGAATATCGAAGGCGGCGAATACT 38820 || |||||| |||| | || |||||||| | ||| |||| ||||||||| || Sbjct 146684 CC-----CGCCATCTACGACCGCGCCTACCTGCAGGGGAACATCGCGGGCGGCGAAGGCT 146630 Query 38821 TCGATTGGTATTACTTGAACGCAGCCGACCGGGCCGCGCAAATCCGCACGCCTATTACCG 38880 |||| |||| ||| ||||| || ||||| ||||||| |||| || || || || | Sbjct 146629 TCGACTGGTTCTACCCCAACGCGGCTGACCGATCCGCGCAGGTCCGGACCCCCATCACGG 146570 Query 38881 ACGGTGCCTACGGTAAACCATGGGTATTCCGCAACAAAGACTTCCGTTCTTGGTGGAATA 38940 |||| ||| | || || ||||| ||||| |||| || | || | |||||| | Sbjct 146569 ACGGCGCCGCAAGCAAGCCGTGGGTCTTCCGTTACAAGGATCTGCGCGCCTGGTGGTCGA 146510 Query 38941 ACTACCATTACAACCGCCCCGGCTACGTCGAAGACGCTTCGCCGACGGGTTGGGTTCCTA 39000 || || ||||||||||| ||| || || ||| ||||||||| |||| || Sbjct 146509 ACCCGCACTACAACCGCCCGGGCGGGGTGGAGAGCGCGACGCCGACGGAGTGGGCGCCGC 146450 Query 39001 ATTCAAAGCCGATTTGGTTTACTGAATTCGGCTTTCCTGCGGTCGATAAAGGCACCAATC 39060 | || |||||||| ||||| || || || |||| ||| || |||| ||||| || | Sbjct 146449 AGTCGAAGCCGATCTGGTTCACCGAGTTGGGCTGTCCCGCCATCGACCGGGGCACGAACC 146390 Query 39061 AACCAAACGTTTTCTACGACCCTAAGTCTTCCGAAAGC 39098 | || ||||| |||| ||| || ||||| || || ||| Sbjct 146389 AGCCGAACGTCTTCTTCGATCCAAAGTCGTCGGAGAGC 146352 Score = 96.9 bits (106), Expect = 9e-16 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 38194 TGCGCGTAGTGTTCTACCCGTTCGTGCTTATGGACGTGCCCACAGGCAACACGCTACCGA 38253 ||||||| ||||| |||||| | || |||||||| || | ||||||||||| |||| Sbjct 147331 TGCGCGTGACCTTCTATCCGTTCCTCCTGATGGACGTCCCGCCCGGCAACACGCTGCCGA 147272 Query 38254 ACCCATACAGCGACAACGCCGCCGACGTAGGGCAACCGGCCTTCCCGTGGCGCGGTCGTA 38313 |||| || ||||||||||||||| || || || | ||||| |||||||| || | Sbjct 147271 ACCCTTATTCCGACAACGCCGCCGAGACGGGCCAGCCCACATTCCCCTGGCGCGGCCGGA 147212 Query 38314 TCACATGCAGCCCCGCACCGGGCTACGTCGGCACCGCCGATAAGAC 38359 |||| || || || | ||||| | ||| | || || ||||| Sbjct 147211 TCACCTGTTCGCCTGCGTCAGGCTATGCCGGGAGCGTGGACAAGAC 147166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 134287966650760