Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_026611.1 Length=43129 Score E Sequences producing significant alignments: (Bits) Value seq42597 100 8e-17 >seq42597 Length=6154 Score = 100 bits (110), Expect = 8e-17 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 38624 GCCCAGCAGTCCTTCAACGAGTACATCCGAGAGCGAGATAAAGACCAACCGTGCATCAGC 38683 || |||||| | |||||||||| ||| || ||| || || || ||||||||||| Sbjct 1678 GCTCAGCAGGCGTTCAACGAGTTCATTCGCCTGCGCGACGCGGATCAGCCGTGCATCAGT 1737 Query 38684 TGCGGCCGCTACCACTCCGGGCAATGGCACGGCGGGCATTATCGAACCACCGGCGCTAAC 38743 ||||| ||| | ||| |||||| | |||| |||||| || || || | || | | Sbjct 1738 TGCGGTCGCCATCACGACGGGCAGTATCACGCCGGGCACTACCGCACGGTTGCTGCCAGC 1797 Query 38744 CCTGAGCTTAGGTTCGATGAGTTTAACTGTCACAAGCAGTGCGCCCCCTGCAATAACCAC 38803 || ||||| | ||||| ||| ||| ||||| || |||||||| ||||| |||||| Sbjct 1798 CCCGAGCTGCGTTTCGAGCCGTTGAACGTCCACAAACAATGCGCCCCATGCAACAACCAC 1857 Query 38804 CTATCCGG 38811 |||||| Sbjct 1858 AAATCCGG 1865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137596071119912