Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2234 123 3e-23 seq77092 86.0 6e-12 seq2937 82.4 8e-11 >seq2234 Length=154088 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| ||||||| || | ||| || |||||||| || || || ||||| || Sbjct 11192 CCTCCTCTAAGTCGCAGAACCAAGTGAAGAGTGGATTCTTTCTGGATATTGTAATCAGAC 11133 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || |||||||| || || || ||||| | |||||| || || || Sbjct 11132 AGAGTACGACCATCTTCAAGCTGTTTTCCGGCGAAGATCAATCTCTGCTGGTCTGGAGGG 11073 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| || || |||||| |||||| || | ||||||| | ||| || Sbjct 11072 ATGCCTTCTTTATCCTGGATTTTTGTTTTGACATTTTCTATTGTGTCGCTAGGTTCAACT 11013 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || | || ||||| || || || | ||| || ||||| ||||||||| Sbjct 11012 TCTAACGTTATGGTCTTCCCTGTCAGAGTCTTTACGAATATTTGCATT 10965 Score = 123 bits (136), Expect = 3e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| |||| ||| || | ||| || || ||||||||||| ||||||||||| | Sbjct 11876 CCTCCTCTTAGTCTCAAGACCAAGTGAAGGGTTGATTCCTTTTGGATGTTGTAGTC--CG 11819 Query 134547 ACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || | || | || || ||||| ||||| ||||| || || || || ||||| || | Sbjct 11818 ACAGAGTACGTCCATCTTCTAGCTGCTTGCCCGCAAAGATTAATCGTTGTTGATCAGGAG 11759 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || ||||| || ||||||||||| |||||| || | ||| || | || | Sbjct 11758 GGATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATTGTATCACTTGGCTCAA 11699 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || || || || | |||||| ||||| |||||||| Sbjct 11698 CTTCTAGTGTAATTGTCTTCCCAGTAAGAGTTTTGACGAAGATTTGCAT 11650 Score = 123 bits (136), Expect = 3e-23 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||||||||| || || || || || || ||||| ||||||||||| || || | Sbjct 12104 CCTCCTCTGAGTCTTAAAACCAGATGCAGAGTAGATTCTTTTTGAATGTTATAATC--CG 12047 Query 134547 ACGGTGTGAGAG--TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 || | || | || || || || || || |||||||| |||||||||||||| || | Sbjct 12046 ACAGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATTAAACGCTGCTGATCTGGGG 11987 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | || |||||||| || || |||||| ||| || || | || || | ||| | Sbjct 11986 GAATTCCTTCTTTGTCCTGGATTTTTGCTTTAACATTTTCAATGGTATCACTTGGTTCGA 11927 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || | ||||| |||||||| |||| ||| || || ||||||||||| Sbjct 11926 CTTCTAATGTAATTGTTTTACCTGTTAGAGTCTTTACAAAAATTTGCAT 11878 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| || | ||| || || ||||| || ||||| || |||||||||||||| Sbjct 11420 CCTCCTCTAAGCCTCAAGACTAGATGTAGAGTAGATTCTTTCTGAATGTTGTAGTCCGAT 11361 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || || || || || || ||||||||||||||||| || || || || Sbjct 11360 AGAGTACGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAAACGCTGTTGGTCTGGGGGA 11301 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| |||||| ||||| || | ||||||| | ||| Sbjct 11300 ATACCTTCTTTATCTTGGATTTTTGTCTTGACATTTTCTATTGTGTCGCTAGGTTCACTT 11241 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || |||||||| || || |||||||| Sbjct 11240 TCTAAGGTTATGGTCTTCCCTGTCAAAGTTTTGACAAATATTTGCAT 11194 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | || | || || || || || || || ||||| |||||||| || Sbjct 12332 CCTCCTCTTAATCTGAGAACTAGATGGAGTGTAGACTCTTTTTGGATGTTGTAATCCGAC 12273 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || |||||||| || |||||||||| | |||||||| || || Sbjct 12272 AGGGTACGCCCATCTTCAAGCTGTTTACCAGCAAAAATCAGCCTTTGCTGATCTGGTGGA 12213 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||||||||| |||||||||||| |||||| || | ||| ||| | ||| || Sbjct 12212 ATGCCTTCTTTATCTTGAATTTTTGTTTTGACATTTTCAATTGTATCGCTTGGTTCTACT 12153 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || ||||| || || || | |||||||| ||||||||||| Sbjct 12152 TCTAAGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAAATTTGCAT 12106 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||||||| | | || || || || |||||||||||||||||||||||||| Sbjct 10736 CCACCTCTGAGCCTGAGAACTAGATGAAGTGTGGATTCCTTTTGAATGTTGTAGTCCGAG 10677 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || | ||||| || ||||| ||||| || || ||||| || || Sbjct 10676 AGGGTTCTTCCATCTTCCAATTGTTTTCCAGCAAAGATCAATCGTTGTTGATCTGGAGGA 10617 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| || ||||| || || || || | || || | || || Sbjct 10616 ATTCCTTCTTTGTCCTGAATCTTGGCCTTTACATTTTCAATGGTATCACTAGGCTCAACC 10557 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGT 134718 || ||||| ||||| || ||||| | |||||| || ||||| |||||||||| Sbjct 10556 TCTAGAGTGATGGTCTTGCCGGTGAGAGTTTTCACAAAAATCTGCATTTTGT 10505 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 |||||||| | | || || | |||| || ||||| ||||| |||||||| || | Sbjct 11648 CCTCCTCTCAACCTCAGAACTAAATGTAATGTAGATTCTTTTTGGATGTTGTAATCAGAA 11589 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || || || || | ||| || || |||||||| | | ||| ||||| || || Sbjct 11588 AGAGTACGACCATCTTCCAACTGCTTACCAGCAAAAATTAGCCTCTGTTGATCTGGGGGG 11529 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| |||||| || | |||||| | || || Sbjct 11528 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTGTCACTAGGCTCTACT 11469 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || |||| ||||| |||||||||||||| Sbjct 11468 TCCAAGGTGATGGTTTTGCCAGTTAGGGTTTTCACGAAAATTTGCAT 11422 Score = 104 bits (114), Expect = 2e-17 Identities = 143/200 (72%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| ||| | ||| || || || || || ||||| || |||||||| ||||| Sbjct 12644 CCTCCTCGGAGCCTCAAGACTAGATGCAGAGTTGATTCTTTCTGAATGTTATAGTCCGAT 12585 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || || ||||| ||||| || || || | ||||||||| || || Sbjct 12584 AGGGTTCGGCCATCTTCAAGTTGTTTACCTGCGAAGATTAACCTCTGCTGATCTGGAGGA 12525 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| ||| || || | || || | ||| || Sbjct 12524 ATACCTTCTTTATCTTGAATTTTAGCTTTCACATTCTCAATGGTATCACTTGGTTCAACT 12465 Query 134667 TCGAGAGTAATGGTTTTACC 134686 || ||||||||||||||||| Sbjct 12464 TCAAGAGTAATGGTTTTACC 12445 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 |||||||| | | | || | |||||| || |||||||| || || || || || | | Sbjct 12872 CCTCCTCTCAACCTGAGAACCAAGTGTAGAGTAGATTCCTTCTGGATATTATAATCTGAC 12813 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | || | || || || ||||| || ||||| || || | ||||||||| || || Sbjct 12812 AAAGTTCTGCCA-TCTTCAAGTTGTTTACCAGCAAAGATTAACCTCTGCTGATCTGGGGG 12754 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || |||||||| || || ||||| ||| || || | ||| || | ||| || Sbjct 12753 AATACCTTCTTTATCCTGGATTTTGGCTTTCACATTCTCAATTGTATCACTAGGTTCAAC 12694 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || |||||||| || || | |||||||| ||||||||||| Sbjct 12693 TTCTAAGGTGATGGTTTTGCCAGTCAGGGTTTTAACAAAAATTTGCAT 12646 >seq77092 Length=4929 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 21716 AGAGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACG 21775 || || | ||||||| ||| | ||| || || || ||||||||||||||| |||| Sbjct 283 AGTGAGAGGCAAAATCACAGTGTAGTCCTTCATCTCGACTAATCAATTCGTTGCTAAACG 224 Query 21776 TGAGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaa 21835 | | || |||||||| || || || || | |||||| |||||||||| || || | Sbjct 223 TTAATCCAGGCATTAATCCCCGTTTCTTTAACCGAAAAATGGCCGCAAAGCAACATGAGA 164 Query 21836 aaaaCACGCCCTCCACAATGGCGAACGCCACC 21867 |||| | || |||||| ||| || |||||| Sbjct 163 AAAAGATTCCTTCCACAGCGGCAAAGGCCACC 132 >seq2937 Length=135122 Score = 82.4 bits (90), Expect = 8e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 134610 CCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCG 134669 ||||| || ||||||||||| ||| || || | || || || | ||| || ||| Sbjct 14791 CCTTCCTTGTCTTGAATTTTGGCTTTCACATTTTCAATGGTATCAGAGGCTTCGACCTCG 14732 Query 134670 AGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||||||||||||| || || ||||| || |||||||| ||||||||| Sbjct 14731 AGAGTAATGGTTTTCCCAGTCAAAGTCTTCACGAAAATCTGCATTTTG 14684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504259762674720