Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq137299 185 1e-41 seq5 179 5e-40 seq1499 158 2e-33 >seq137299 Length=1270 Score = 185 bits (204), Expect = 1e-41 Identities = 498/759 (66%), Gaps = 31/759 (4%) Strand=Plus/Plus Query 160960 GAAAGCTTTAATCTCTGGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACT 161019 ||| ||||| || ||||||| || ||||||||||| ||||||||||| || | || || Sbjct 135 GAAGGCTTTGATTACTGGTATCACAGGGCAGGATGGCTCCTATCTTGCCGAGTTCCTGCT 194 Query 161020 GAAGAAGGGGTATGAAGTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGGAAG 161079 | ||||||| ||||| || || || |||| ||| | | || |||||||| || | | Sbjct 195 GGAGAAGGGTTATGAGGTGCACGGGATTAAGCGTCGTGCTTCTTCGTTTAACACCGAGCG 254 Query 161080 AATCGATCATATCTTC---GATC------------------AGTTACACCTCCACTACGG 161118 || || ||||||| | |||| || | | || ||||| || Sbjct 255 TATTGACCATATCTACCAGGATCCGCACCAGCCGAACCCGAAGCTGAAGCTGCACTATGG 314 Query 161119 GGATTTGACTGACTCCCTGAACAT-AGTCTCTATCATTAAGGAAGTAGAACCTGATGAGA 161177 |||| |||| || | ||| | | || | ||| || || || || ||||| ||| Sbjct 315 GGATCTGACGGATACATCGAATTTGATTCGC-ATCCTTCGTGAGGTTGAGCCTGACGAGG 373 Query 161178 TCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATATACAG 161237 |||||||||| || |||||| |||||| || |||||| || ||||| || | Sbjct 374 TCTACAACCTTGGTGCACAGTCACATGTGGCGGTGAGCTTCGAGTCTCCGGAATACACTG 433 Query 161238 CACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGTATGA 161297 | | |||||| | || || || | | | |||| |||| | | || || Sbjct 434 CGGACGTTGATGCCATTGGCACGCTGCGTCTGCTTGAGGGCATTCGATTTTTGGGGTTGG 493 Query 161298 C--AGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGA 161355 ||| | | || |||||||||| || ||| |||| ||||||| ||||| || || Sbjct 494 AGAAGAAAACG--CGCTTCTACCAGGCTTCGACCTCTGAGCTGTATGGCTTGGTGCAGGA 551 Query 161356 GACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACT 161415 | |||||||||||||| || || ||||| || || || || | || || ||| | Sbjct 552 AATTCCACAGAAAGAAACCACGCCATTCTATCCGCGCAGCCCGTACGCGGTGGCGAAAAT 611 Query 161416 CTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGG 161475 || | || ||||| | ||||||| | ||| ||| || || |||| | | || Sbjct 612 GTACGCGTACTGGATCGCTGTGAACTACCGTGAGTCTTACGGTATTTACGCTTGCAACGG 671 Query 161476 TATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTAC 161535 ||| | ||||||||||||||||| || || || ||||| || || || || ||| | || Sbjct 672 GATTTTGTTCAACCATGAGTCACCGCGTCGTGGCGAGACCTTTGTGACACGCAAGGTCAC 731 Query 161536 TAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTAAA 161595 |||||||| || ||| | || || || | || || || | || || | | Sbjct 732 CAGGGGACTGGCCAATATCGCTTTGGGTCTGGAGCAATGCCTTTATATGGGCAACATGGA 791 Query 161596 CTCAAGACGAGATTGGGGTCATGCTGAAGACTATGT--GGAGGCTATGTGGTTGATGTTA 161653 || || || ||||| ||||| | |||||||| | | || |||| ||||| | Sbjct 792 TTCGTTGCGCGACTGGGGGCATGCCAAGGACTATGTGCGCATGC--AGTGGATGATGCTG 849 Query 161654 CAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGT 161692 || ||||| || || |||| ||| ||||| || ||| Sbjct 850 CAGCAGGAGCAGCCGGAAGACTTTGTCATTGCTACCGGT 888 >seq5 Length=869209 Score = 179 bits (198), Expect = 5e-40 Identities = 372/548 (68%), Gaps = 12/548 (2%) Strand=Plus/Plus Query 161150 ATCATTAAGGAAGTAGAACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGAAA 161209 || ||| || | || | || ||||| || || ||| |||| ||||| || ||||| Sbjct 384941 ATTATTCAGCAGGTGCAGCCGGATGAAATTTATAACTTAGGTGCACAAAGCCATGTAGCG 385000 Query 161210 GTATCTTTCGAGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTA 161269 ||| ||| || | ||| |||||||| || | ||||||| | || || || | | Sbjct 385001 GTAAGTTTTGAAGCACCAGAATATACGGCTGATGTTGATGCTATTGGTACGCTGCGGATT 385060 Query 161270 TTGGAGGCAGTTCGTCTCCTAGGTATGACAGAT-AGGGTCCGTATCTACCAGGCATCCAC 161328 | || || ||||| | ||||| | | ||| | |||| | || ||||| || || Sbjct 385061 CTAGAAGCGATTCGTATTTTAGGTTT-AGAGAAGAAAACCCGTTTTTATCAGGCGTCAAC 385119 Query 161329 CAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAACAACACCTTTCTACCC 161388 |||| ||||||| || || || |||| |||||||||||||| || || || ||||| Sbjct 385120 TTCTGAGCTGTATGGTTTAGTGCAGGAGATTCCACAGAAAGAAACCACGCCGTTTTACCC 385179 Query 161389 ACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATT---GTAAAGAACTACAG 161445 ||| || || |||| |||||||||| | |||| || |||||| ||| |||||| | Sbjct 385180 ACGGTCACCTTATGCCGTAGCTAAAATGTATGCTTACTGGATTACCGTA---AACTACCG 385236 Query 161446 AGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATGAGTCACCACGACG 161505 || |||||| ||| | ||| ||| |||||| |||| |||||||| || || || Sbjct 385237 CGAAGCTTATGGTATGTATGCCTGTAACGGTATTTTATTTAACCATGAAAGTCCGCGCCG 385296 Query 161506 GGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCGTATTAGTACAGGACT 161565 ||||| || || ||||| ||||| ||||| | || || | |||| ||| || Sbjct 385297 TGGTGAAACCTTTGTAACACGTAAAATTACCCGCGGTTTAGCGAATATTGCCCAAGGTCT 385356 Query 161566 ACAGGATTGTCTATACCTAGGTAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGA 161625 || ||| ||| | || ||| | | | ||| |||||||| ||||| |||| Sbjct 385357 TGAGCCATGTTTATTTATGGGCAATATGGATGCCTTACGTGATTGGGGGCATGCCAAAGA 385416 Query 161626 CTATGT--GGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTGATGACTATGTGATT 161683 ||||| | | || |||| |||||||||| || || || || |||| ||| || Sbjct 385417 TTATGTCCGCATGC--AGTGGATGATGTTACAGCAAGATCAACCAGAAGACTTTGTTATC 385474 Query 161684 GCCACAGG 161691 || || || Sbjct 385475 GCGACTGG 385482 >seq1499 Length=182485 Score = 158 bits (174), Expect = 2e-33 Identities = 347/520 (67%), Gaps = 0/520 (0%) Strand=Plus/Plus Query 161174 GAGATCTACAACCTAGGGGCACAGAGTCATGTGAAAGTATCTTTCGAGGAACCTGAATAT 161233 |||||||| ||||| | ||||| ||||| || || |||||| || |||||| Sbjct 181620 GAGATCTATAACCTGGCCGCACAATCGCATGTTAAGGTTAGTTTCGACACCCCAGAATAT 181679 Query 161234 ACAGCACAGACTGATGCTCTGGGAACCCTAAGAGTATTGGAGGCAGTTCGTCTCCTAGGT 161293 ||||| | |||||| |||| ||||| | | || ||||| |||||| | |||| Sbjct 181680 ACAGCTAACGCTGATGGCTTGGGGACCCTTCGGATTTTAGAGGCGGTTCGTTTATTAGGA 181739 Query 161294 ATGACAGATAGGGTCCGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAA 161353 || || ||| ||||| || ||||| || |||| | ||||| ||||| ||| Sbjct 181740 CTGGTTGAACATTGCCGGATCTATCAAGCATCTACTTCTGAGCTATATGGCTTGGTGCAA 181799 Query 161354 GAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAA 161413 | || |||| || ||||| || ||||| || || || |||| ||||| ||| Sbjct 181800 CAAGTGCCGCAGAGTGAGACAACGCCATTCTATCCGCGTAGCCCTTATGCGGTAGCCAAA 181859 Query 161414 CTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGT 161473 || ||||| || |||||| ||||| | ||| |||| ||| | || ||| | Sbjct 181860 CTATATGGCTACTGGATTACGGTCAACTATCGCGAGGCTTATAACATGTATGCTTGTAAT 181919 Query 161474 GGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATT 161533 ||||| ||||||||||||| || ||| || || || || || ||||| || || Sbjct 181920 GGTATATTATTCAACCATGAAAGCCCTGTACGTGGGGAAACCTTTGTGACCCGAAAAATC 181979 Query 161534 ACTAGGGGACTATCCCGTATTAGTACAGGACTACAGGATTGTCTATACCTAGGTAATCTA 161593 || || | | | || | ||| |||||||| ||| ||| || || || Sbjct 181980 ACAAGAGCAGCTGCGAAGATCGTTTTAGGCTTACAGGATAAATTATTCCTTGGAAACCTT 182039 Query 161594 AACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTA 161653 | ||| |||||||| ||||| |||| |||||||| ||||||||| | || | Sbjct 182040 TCTGCGCAACGCGATTGGGGACATGCGAAAGATTATGTGGAAGCTATGTGGCTTATCCTT 182099 Query 161654 CAACAGGAAACTCCTGATGACTATGTGATTGCCACAGGTA 161693 || ||||||| | | || |||| ||| ||||| || |||| Sbjct 182100 CAGCAGGAAATTGCCGAAGACTTTGTCATTGCTACTGGTA 182139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728285105107680