Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq5 109 6e-19 >seq5 Length=869209 Score = 109 bits (120), Expect = 6e-19 Identities = 286/429 (67%), Gaps = 12/429 (3%) Strand=Plus/Plus Query 60071 CTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTA 60130 || || |||||||||||||| ||||| || ||||| ||||| ||||||||||| || ||| Sbjct 710762 CTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTA 710821 Query 60131 TTGATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGAT 60190 |||| | |||||| | |||| || || |||||||| | | ||| || | Sbjct 710822 CTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCCACCTCCAGTGCCATTGTAAAA 710881 Query 60191 TATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGC 60250 || || || | || || || || || | | | || ||||| | | |||||| Sbjct 710882 TACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTTAGGTAGC 710941 Query 60251 CCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTGGTTCC--ATTCATCAAGTATTT-- 60306 || |||||||| || ||| | ||||| || ||| ||| || || ||| |||| Sbjct 710942 CCAATCCGTAATGGCGAAGCCTTTCATACTGG-CTGTATCCCGTTTTAT-AAGCATTTCC 710999 Query 60307 -GACTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGG-ATCGGCAACATGC 60364 ||| || | || ||||| ||||||||| | |||||||| || || | || Sbjct 711000 AGAC---CGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCTGT 711056 Query 60365 TATGTTCCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGA 60424 | | ||| | |||||| || | || | | || || ||||| ||||| || Sbjct 711057 TCT-ACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGGT 711115 Query 60425 TTGGAAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTCATGTTC 60484 | ||||||||||| | | | | | | |||||||| | ||| |||||||| | |||| Sbjct 711116 GTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTAT 711175 Query 60485 GAGCGCCTG 60493 |||||||| Sbjct 711176 CAGCGCCTG 711184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502730415996480