Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_027119.1
Length=157498
Score E
Sequences producing significant alignments: (Bits) Value
seq5 109 6e-19
>seq5
Length=869209
Score = 109 bits (120), Expect = 6e-19
Identities = 286/429 (67%), Gaps = 12/429 (3%)
Strand=Plus/Plus
Query 60071 CTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTA 60130
|| || |||||||||||||| ||||| || ||||| ||||| ||||||||||| || |||
Sbjct 710762 CTGCCGACACCTATTATGTCGGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTA 710821
Query 60131 TTGATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGAT 60190
|||| | |||||| | |||| || || |||||||| | | ||| || |
Sbjct 710822 CTGATTGAGTGTGGTGACAGCCTGGATTCGATCAATGCCACCTCCAGTGCCATTGTAAAA 710881
Query 60191 TATGTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGC 60250
|| || || | || || || || || | | | || ||||| | | ||||||
Sbjct 710882 TACGTGTCGCAGCGCGCAGGTATTGGTATTAACGCAGGCCGTATTCGCGCTTTAGGTAGC 710941
Query 60251 CCTATCCGTAAAGGGGAAATGGTCCATACAGGTCTGGTTCC--ATTCATCAAGTATTT-- 60306
|| |||||||| || ||| | ||||| || ||| ||| || || ||| ||||
Sbjct 710942 CCAATCCGTAATGGCGAAGCCTTTCATACTGG-CTGTATCCCGTTTTAT-AAGCATTTCC 710999
Query 60307 -GACTGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGG-ATCGGCAACATGC 60364
||| || | || ||||| ||||||||| | |||||||| || || | ||
Sbjct 711000 AGAC---CGCAGTAAAAAGCTGCTCGCAAGGCGGTGTGCGTGGTGGTGCCGCCACCCTGT 711056
Query 60365 TATGTTCCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGA 60424
| | ||| | |||||| || | || | | || || ||||| ||||| ||
Sbjct 711057 TCT-ACCCCTTGTGGCATCTGGAAGTGGAATCGCTGCTGGTACTGAAAAATAACCGCGGT 711115
Query 60425 TTGGAAGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTCATGTTC 60484
| ||||||||||| | | | | | | |||||||| | ||| |||||||| | ||||
Sbjct 711116 GTAGAAGAGAACCGGGTAAGGCATCTGGACTATGGCGTGCAGTTTAACCGCCTGATGTAT 711175
Query 60485 GAGCGCCTG 60493
||||||||
Sbjct 711176 CAGCGCCTG 711184
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502730415996480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |