Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027292.1 Length=39167 Score E Sequences producing significant alignments: (Bits) Value seq34826 154 4e-33 >seq34826 Length=13225 Score = 154 bits (170), Expect = 4e-33 Identities = 193/262 (74%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 30062 TACAACTTCCTACACAAGCAGTTGTTCATGGAGTCCCGTTTCAATCCCAACGCCAAGTCG 30121 ||| || |||| |||||||| | |||| ||| ||| ||||| || || ||| | Sbjct 8071 TACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAAGCCGTGAGC 8012 Query 30122 AAGACCGGCCCTCGTGGTCTCGGTCAGTTCACTACGGCAACCGGTAAGGCTTACGGGCTG 30181 || || ||||| ||| |||| |||||||| | ||| || || || || ||||| ||| Sbjct 8011 CCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTG 7952 Query 30182 GAAACCGATGAGGACTTCTTCGATCCTGAAAAGTCCATCGACGCTGCTGCACGTCACCTG 30241 ||||| |||||||||||||| || | |||||||||||||| || || || ||| || Sbjct 7951 ATCACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACGCAGCCGCTCGGCACATG 7892 Query 30242 AAGGACAACCTTACGGCGTCCAATGGGGATTACCTCGAAGCTGC-CCTTCTGTACAACCA 30300 |||||||| | ||||||||| || || | || |||| || ||| |||||||||| Sbjct 7891 CGCGACAACCTCAAGGCGTCCAACGGCGACGAGCT-GAAGGCGCTCCTGATGTACAACCA 7833 Query 30301 AGGGGGTGGCCGTCTGGGTCGC 30322 ||||| ||||| |||| ||| Sbjct 7832 AGGGGCTGGCCCGGTGGGCCGC 7811 Score = 131 bits (144), Expect = 4e-26 Identities = 452/690 (66%), Gaps = 29/690 (4%) Strand=Plus/Minus Query 32187 TTCAGAAAGCTGTTGAAGAGTACGCCCGCAACAAGGCTTACGGTATCAGCCACACCCAAG 32246 ||||| || || || |||||||| | ||||||| || || ||||||||| || | Sbjct 5931 TTCAGGCGGCAGTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACC 5872 Query 32247 ACTTCAATCGCAGCCACT-TGGTTGACGATCAGTTGACCGGTCTGGTCGGTGCTG-AGAA 32304 ||||| || | | | |||| || || || ||| || | || | | ||| |||| Sbjct 5871 GCTTCACG-GCTGACTCGCTGGTAGAGGAGCACCTGAA-GGACGGGGCAGGCCTGGAGAA 5814 Query 32305 CAACAACTTCCTCGAAGGTCGTCACCTGTTCGATTCGGACATG--GAAGTCCACGTTGGC 32362 |||| ||| |||||||| |||| |||| ||||| || || ||| || || || | Sbjct 5813 CAACGACTACCTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTG- 5755 Query 32363 AATGGTCAGATGTTCAGTGTCAACGACCTGCGCAACTTCGACATGACCCACATCACTCCG 32422 | || ||| |||| ||| || ||||| || ||||| || || | | ||| Sbjct 5754 -ACGGCCAGCCGTTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCCG 5696 Query 32423 GGTTACGACCGCCGTGTAAACGGTGACATCGCAATCATGGGTGCAACCGGTGAGTCCACT 32482 ||||||||| | || |||||||||||||| ||||||||| ||||| || ||| Sbjct 5695 CAGTACGACCGCAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAGGACACC 5636 Query 32483 GCGGCCTTTAAGGAC--------CGCATTACGGCTCTGGGCGTGGGCCAAGA--AGGCCG 32532 | || | ||| || || | | || | || | | ||| | ||| || Sbjct 5635 CGGACCCTGAAGAACATGGTCAACGGAATGCGCCAAAGGTCC--GCCCACGGCGAGGACG 5578 Query 32533 CAAGGAAA--TGAAAGCCCTTCA-GGACGCCTTGAAGATCATCACTGGCCGTGCCCGTCG 32589 | || | |||| || ||| ||||||| ||||||| |||| || || || || || Sbjct 5577 CTCGGGAGGCTGAATACC--TCATGGACGCCCTGAAGATGCTCACCGGACGCGCTCGGCG 5520 Query 32590 CGACCCTGATGGTGTGATGGCGACCGTTGCTCGTTCCCTGAGCGACATGTCGTTCCTCGC 32649 ||| ||||| || ||||||||| || || ||| ||| |||||| ||| | | Sbjct 5519 CGATCCTGACGGCACCTGGGCGACCGTAGCGCGATCCTTGAACGACATCGGGTTTGCCAC 5460 Query 32650 TAAGAACGCCTACATGGGCATCCAAGGGATCACGGAGACTGCTGCACTGGTCACCAAGGG 32709 |||||||||||||||||| | || ||||| ||| | || | ||| || |||||| Sbjct 5459 GAAGAACGCCTACATGGGCGTACAGAACATCACCGAGGCCGCGTCCCTGATCGTCAAGGG 5400 Query 32710 TCACACACGGATGCTGATGAAGGGTGTTCCATTCTTCAACGAGATCGCCAC--CATGGGA 32767 ||| |||||| ||||||| | || | |||| || |||| || |||| Sbjct 5399 CCACCAGAAGATGCTCCTGAAGGGCATCCCGATGCTCAAGAAGTGGTCCACGGCA-GGGA 5341 Query 32768 TCTAAGGCAACCCCTAAGTTCCTCGACGACATGCACGGTCTGGTGTTCGGTCGTGAACTG 32827 | ||| | | | || | || |||||||| ||| | ||||| || ||| Sbjct 5340 -CAAAGCTGGAGCTGGACGACATCAAGGAGATGCACGGCCTGATCTTCGGCAAGGAGCTG 5282 Query 32828 GACAACCTCATTCGTCCGACCCGTCAGGAC 32857 ||| || ||||||| || ||||| |||||| Sbjct 5281 GACGACATCATTCGGCCCACCCGGCAGGAC 5252 Score = 107 bits (118), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 3/205 (1%) Strand=Plus/Minus Query 10339 ATCACCCTGCGTGTCGCGGACAGCAAGGGCAAGACCATGACCGTCGTTCCGAATATCTCG 10398 ||| |||||||||||| ||| |||||||||| |||| | | || ||||| |||||| Sbjct 8545 ATCCCCCTGCGTGTCGTTGACGCCAAGGGCAAGGCCATCGCTGATGTCCCGAACATCTCG 8486 Query 10399 GGCGGCTCGACCCTGAAGCTGCGGTACTCGGTCTTCCCGTACAAGTGGAACACCGCTGTG 10458 || ||||| ||| | || | ||| || |||| ||| |||||| | | ||| Sbjct 8485 GGTGGCTCCGAGGGCAAGGTCCGCTTCTCCATCGTCCCCTACGGCTGGAACCCGACCGTG 8426 Query 10459 GGCGCAAGCGTCAAGCTGCAACTCGAAGGCGTCATGCTGATCGACCTCGTTGAGTTCGGT 10518 ||||| ||| ||||| ||||| |||||| ||||||||| | | || || |||| | | Sbjct 8425 GGCGCCTCCGTGAAGCTCCAACTGGAAGGCTTCATGCTGACCAAACTGGTCGAGTCAGAT 8366 Query 10519 GGTGGCGGTGACGACGAGTGGGGCG 10543 | | ||| | ||||| ||||||| Sbjct 8365 GAT---GGTCAAGACGACTGGGGCG 8344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124944806731128