Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027298.1 Length=36814 Score E Sequences producing significant alignments: (Bits) Value seq11269 549 4e-152 >seq11269 Length=54388 Score = 549 bits (608), Expect = 4e-152 Identities = 387/437 (89%), Gaps = 4/437 (1%) Strand=Plus/Minus Query 18208 CATGCCAGCCACAACGGCGAGGCGCCAACAAGGATCGAAGCCATGACTACGTTCACCAGC 18267 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 10267 CATGCCAGCCACAACGGCGAGGCGCAAACAAGGATCGAAGCCATGACTACGTTCACCAGC 10208 Query 18268 ATCGTTACCACTAACCCTGATTTCGGCGGATTCGAGTTCTACGTTGAAGCGGGACAGCAG 18327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10207 ATCGTTACCACTAACCCTGATTTCGGCGGATTCGAGTTCTACGTTGAAGCGGGACAGCAG 10148 Query 18328 TTCGACGATTCAGCATATGAAGAGGCATACGGTGTTAGCGTTCCTACCGCCGTGGTCGAG 18387 ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 10147 TTCGACGATTCAGCATATGAAGAGGCATACGGTGTTAGCGTTCCTTCCTCCGTGGTCGAG 10088 Query 18388 GAAATGAACGCTAAAGCGGCGCAGTTGAAAGACGGCGAGTGGCTTAATGTCTCGCATGAA 18447 ||| ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 10087 GAAGTGAACGCGAAAGCGGCGCAGTTGAAAGTCGGCGAGTGGCTTAATGTCTCGCATGAA 10028 Query 18448 GCCTGACGCCTCCAGCCACAATCCAGACCCGCGCTACCTGCGCGGGCTGCTCAAGAAAGC 18507 |||||||||||||| ||||||||||||||||| |||||||||||||||| || | ||||| Sbjct 10027 GCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTGGTCGACAAAGC 9968 Query 18508 CGGTATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCCT-CAGTGACAGGGTGATGCGCT 18566 ||| |||||||||| | ||||||||| |||||||||| ||| | || | ||| Sbjct 9967 AGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCTGG-CTTCCGCA 9909 Query 18567 ATTACCTGAGCGAGGACGTCA-AAGAGGGCTACCGTCCCGCGCCGTATACCGTCCAGTTC 18625 | |||||| |||| || |||| | || ||| || |||| || ||||| || || ||| Sbjct 9908 ACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTATACAGTTCAATTC 9850 Query 18626 GCCCTGGAGTGCCTTGC 18642 | || || ||||| || Sbjct 9849 TCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117431322352832