Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027329.1 Length=87510 Score E Sequences producing significant alignments: (Bits) Value seq57423 84.2 1e-11 >seq57423 Length=6334 Score = 84.2 bits (92), Expect = 1e-11 Identities = 141/202 (70%), Gaps = 8/202 (4%) Strand=Plus/Minus Query 86401 CAACTCTAAAGGCTTTAAGGTACTGGATGAGCACATTGGCCTCATCTATGGTGACTCTAT 86460 |||||| |||||| ||| ||||| | |||| |||| | |||||||||||||| || Sbjct 5673 CAACTC--AAGGCTATAAAGTACTCAACGAGCGTGTTGGTTTAATCTATGGTGACTCGAT 5616 Query 86461 CACGTTGGAACGTGCAAACGAAATCCTGAAGCGTTTGTATGAAATGGGTTTTGCAAGTTC 86520 || | |||||||| | | ||| | || | ||| | | | || ||||| ||| Sbjct 5615 TACTCTAGAACGTGCGCAAAATATCTTAAAAGGCTTGGAAGCCAAAGGCTTTGC---TTC 5559 Query 86521 ---TAACGTAGTGTTTGGTGTAGGTTCTTACACTTACCAGTACATGACTCGTGACACCTT 86577 ||| |||| |||||| | ||| || || ||| | || | |||||||||||||| Sbjct 5558 GAATAATCTAGTCTTTGGTATCGGTAGCTATACCTACAACTATTTAACTCGTGACACCTT 5499 Query 86578 TGCATTTGCTGTCAAAGCAACT 86599 || ||||| || ||||| ||| Sbjct 5498 TGGTTTTGCCGTAAAAGCCACT 5477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 279292348496916