Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_027331.1
Length=170341
Score E
Sequences producing significant alignments: (Bits) Value
seq5 159 4e-34
>seq5
Length=869209
Score = 159 bits (176), Expect = 4e-34
Identities = 334/494 (68%), Gaps = 9/494 (2%)
Strand=Plus/Minus
Query 143043 GCATCATACAGTTCACCGCCAGAAACATCTGGACTGAACAGAGTTATGTATTCATCTTTG 143102
||||||||||| | ||| || | || || ||||||| || || || ||||||||
Sbjct 711243 GCATCATACAG--CCCCGGCACAT-CAGAGGGGCTGAACAAGGTGATATAGTCATCTTTA 711187
Query 143103 CCAAGACGTTCCATCATCAGGTCGTTGATTTGAAGACCATAGTCCAGGTGACGAATTCGG 143162
|| || | ||||||| ||| | || | ||||||||||| || | | |||
Sbjct 711186 ATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGG 711127
Query 143163 TTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAA 143222
|| || ||||| || ||| || || ||||| || || || ||||| ||||||||
Sbjct 711126 TTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCAC 711067
Query 143223 ATTGGATAGTACAATGTTGCGGCACCACCACGAACTCCGCCTTGGGAACAGGATTTAACT 143282
| || ||| ||| || |||||||||||||| || |||||||| || ||| ||| |||
Sbjct 711066 AAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACT 711007
Query 143283 GCAGTTTGGAAGTGTTTCCAGAAAGGAATAACTCCAGTATGCTTGACTTCACCGTTTCCG 143342
|| || ||||| || || | || || ||| |||||||| | |||| || || | |
Sbjct 711006 GCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGG 710947
Query 143343 ATTTTTGAACCTTCTGCACGCAACATCCCCGCGTTAATGCCAATACCTGCACGCTTACTG 143402
||| |||| || || | || |||||||| ||||||||||| ||||
Sbjct 710946 ATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTGCGAC 710887
Query 143403 ATATACTCAATAATGCTTGCACTGGCTTTG---TTAATTGACTTAAGTGAGTCACCAGCT 143459
| || | | |||| ||||||| || || || || | || |||||||
Sbjct 710886 ACGTATTTTACAATG---GCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACAC 710830
Query 143460 TCAATAACAACACAAGAGCTAAACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGA 143519
||||| | || || ||||| |||||||| || || ||||| | || | |||||| ||
Sbjct 710829 TCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGT 710770
Query 143520 GTAGGCAAAGAAAT 143533
|| |||| |||||
Sbjct 710769 GTCGGCAGTGAAAT 710756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543735425158560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |