Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq5 159 4e-34 >seq5 Length=869209 Score = 159 bits (176), Expect = 4e-34 Identities = 334/494 (68%), Gaps = 9/494 (2%) Strand=Plus/Minus Query 143043 GCATCATACAGTTCACCGCCAGAAACATCTGGACTGAACAGAGTTATGTATTCATCTTTG 143102 ||||||||||| | ||| || | || || ||||||| || || || |||||||| Sbjct 711243 GCATCATACAG--CCCCGGCACAT-CAGAGGGGCTGAACAAGGTGATATAGTCATCTTTA 711187 Query 143103 CCAAGACGTTCCATCATCAGGTCGTTGATTTGAAGACCATAGTCCAGGTGACGAATTCGG 143162 || || | ||||||| ||| | || | ||||||||||| || | | ||| Sbjct 711186 ATCAGGCGCTGATACATCAGGCGGTTAAACTGCACGCCATAGTCCAGATGCCTTACCCGG 711127 Query 143163 TTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAA 143222 || || ||||| || ||| || || ||||| || || || ||||| |||||||| Sbjct 711126 TTCTCTTCTACACCGCGGTTATTTTTCAGTACCAGCAGCGATTCCACTTCCAGATGCCAC 711067 Query 143223 ATTGGATAGTACAATGTTGCGGCACCACCACGAACTCCGCCTTGGGAACAGGATTTAACT 143282 | || ||| ||| || |||||||||||||| || |||||||| || ||| ||| ||| Sbjct 711066 AAGGGGTAGAACAGGGTGGCGGCACCACCACGCACACCGCCTTGCGAGCAGCTTTTTACT 711007 Query 143283 GCAGTTTGGAAGTGTTTCCAGAAAGGAATAACTCCAGTATGCTTGACTTCACCGTTTCCG 143342 || || ||||| || || | || || ||| |||||||| | |||| || || | | Sbjct 711006 GCGGTCTGGAAATGCTTATAAAACGGGATACAGCCAGTATGAAAGGCTTCGCCATTACGG 710947 Query 143343 ATTTTTGAACCTTCTGCACGCAACATCCCCGCGTTAATGCCAATACCTGCACGCTTACTG 143402 ||| |||| || || | || |||||||| ||||||||||| |||| Sbjct 710946 ATTGGGCTACCTAAAGCGCGAATACGGCCTGCGTTAATACCAATACCTGCGCGCTGCGAC 710887 Query 143403 ATATACTCAATAATGCTTGCACTGGCTTTG---TTAATTGACTTAAGTGAGTCACCAGCT 143459 | || | | |||| ||||||| || || || || | || ||||||| Sbjct 710886 ACGTATTTTACAATG---GCACTGGAGGTGGCATTGATCGAATCCAGGCTGTCACCACAC 710830 Query 143460 TCAATAACAACACAAGAGCTAAACTGACGAGTCGGTGTACGAGCCCCGGCCATAATTGGA 143519 ||||| | || || ||||| |||||||| || || ||||| | || | |||||| || Sbjct 710829 TCAATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTACGCACGCCCGACATAATAGGT 710770 Query 143520 GTAGGCAAAGAAAT 143533 || |||| ||||| Sbjct 710769 GTCGGCAGTGAAAT 710756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543735425158560