Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq5 134 1e-26 seq363 82.4 8e-11 >seq5 Length=869209 Score = 134 bits (148), Expect = 1e-26 Identities = 272/404 (67%), Gaps = 0/404 (0%) Strand=Plus/Minus Query 139546 CTGGACGCCATAATCCATATGACGGATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 139605 ||| |||||||| |||| ||| | | ||||| |||||||| || ||||||||||| Sbjct 711157 CTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAG 711098 Query 139606 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 139665 || || || ||| ||||||| |||||| | || || | || || || || || Sbjct 711097 TACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACC 711038 Query 139666 ACGAATTCCGCCCTGTGAACACGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAAT 139725 ||| | ||||| || || || ||| || || ||||| ||||| || |||| || || Sbjct 711037 ACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGAT 710978 Query 139726 AACACCAGTATGACGCACTTCACCTGTGCCAATCTTAGAACCTTCGGCACGAATCATACC 139785 | ||||||||| |||| || | | || |||| || ||||| || Sbjct 710977 ACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCC 710918 Query 139786 AACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAAGCAGAAGCCTT 139845 ||||||||||||| || ||||| | || | |||| ||||| | | || | Sbjct 710917 TGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGC 710858 Query 139846 ATTGATAGACTTCAGCGAATCACCTGCCTCAATAACAACACATGAACTAAACTGCCGAGT 139905 |||||| || | ||| ||||| |||||| | || || || || ||||| || || Sbjct 710857 ATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGT 710798 Query 139906 TGGAGTACGACAACCAGCCATAATAGGAGTTGGCAATGAAATCT 139949 ||| ||||| || | ||||||||| || |||| |||||||| Sbjct 710797 TGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 >seq363 Length=289854 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/96 (80%), Gaps = 8/96 (8%) Strand=Plus/Minus Query 69197 AACTGGCGGAGGCGATAGGATTCGAACCTATGA---GTCGCCGGAGCGACTGCCGGTTTT 69253 || ||||||||||| | ||||||||| | || || || || | ||||||||| Sbjct 11107 AAATGGCGGAGGCGGTGAGATTCGAACTCACGAACGGTTTCC----CGTC-GCCGGTTTT 11053 Query 69254 CAAGACCGGTGCATTAAACCACTCTGCCACGCCTCC 69289 ||||||||||||||| |||||||||||||||||||| Sbjct 11052 CAAGACCGGTGCATTCAACCACTCTGCCACGCCTCC 11017 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532994877714720