Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027355.1 Length=159071 Score E Sequences producing significant alignments: (Bits) Value seq105130 84.2 2e-11 seq57648 84.2 2e-11 >seq105130 Length=1877 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 35747 TGGTGCCGACTGTACGATTCGAACGCACGACCTACTGCTTACAAGGCAGTCGCTCTAACC 35806 ||||||||||| | ||| | ||||| | ||||||||| ||||||| |||| ||||| ||| Sbjct 135 TGGTGCCGACTATCCGAGTTGAACGGATGACCTACTGATTACAAGTCAGTTGCTCT-ACC 193 Query 35807 AACTGAGCTAAGAAGGCA 35824 |||||||||||| |||| Sbjct 194 AACTGAGCTAAGTCGGCA 211 >seq57648 Length=6294 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 35744 GAATGGTGCCGACTGTACGATTCGAACGCACGACCTACTGCTTACAAGGCAGTCGCTCTA 35803 ||||||||||| | || || |||||| |||||||||||| ||||||| |||| ||||| Sbjct 173 GAATGGTGCCGGCAGTGGGACTCGAACTCACGACCTACTGATTACAAGTCAGTTGCTCT- 231 Query 35804 ACCAACTGAGCTA 35816 ||||||||||||| Sbjct 232 ACCAACTGAGCTA 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507752675547360