Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027381.1 Length=68365 Score E Sequences producing significant alignments: (Bits) Value seq128 96.9 2e-15 >seq128 Length=380166 Score = 96.9 bits (106), Expect = 2e-15 Identities = 219/324 (68%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 8646 GCAACAGATGGTTCTGCTGGTATTGATTTACGAGCCAATACAGTT-ATGCCATTCGAACT 8704 |||||| ||||||| || ||| | ||| |||| || | | | | || ||| ||| | Sbjct 373962 GCAACAAATGGTTCAGCAGGTTTGGATCTACGTGCATGTTTGGATGAGGCGATT-GAAAT 373904 Query 8705 TAAACCGGGAGAAACTACTCTGGTAAATACTGGTTTAGCTATCCATCTGGATGATGTTCA 8764 | | || ||||| | |||| || ||||||||||| || || | || ||| | Sbjct 373903 TGCTGCAGGTGAAACGGTTTTGGTTAAAACTGGTTTAGCAATTTATATTGAAGATCCAAA 373844 Query 8765 CTATGCAGGTATGATTTTACCTCGTTCTGGGTTAGGGCATAAACATGGTATTGTGCTTGG 8824 | ||| ||| | ||||||||||| || || | || |||||||||||||||||| | || Sbjct 373843 TTTTGCTGGTTTAATTTTACCTCGCTCAGGTCTTGGTCATAAACATGGTATTGTGTTAGG 373784 Query 8825 AAATCTTACAGGTCTCATTGATAGTGATTATCAAGGGGAACTGATGGTAAGCCTCTGGAA 8884 || | ||| | ||||| |||||||||||| || || ||||| | ||||| Sbjct 373783 TAACTTGGTCGGTTTAATTGACTCTGATTATCAAGGAGAGCTTATGGTTTCTGTTTGGAA 373724 Query 8885 TCGCTCTACAAAGCCTTTTACTATTA-ATCCAGGTGACCGTATTGCTCAGTTAGTTATTG 8943 ||| | |||| || | ||| | |||||||| ||| | || || | || | | Sbjct 373723 TCG-TGGGCAAAATACCTTCCGTTTAGAACCAGGTGAGCGTTTGGCACAATATGTACTCG 373665 Query 8944 TGCCTGTAATGCAGCCTGAATTTG 8967 | |||||| | || |||| |||| Sbjct 373664 TTCCTGTAGTACAAGCTGAGTTTG 373641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 218162922607496