Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027384.1 Length=37359 Score E Sequences producing significant alignments: (Bits) Value seq11269 567 2e-157 >seq11269 Length=54388 Score = 567 bits (628), Expect = 2e-157 Identities = 398/449 (89%), Gaps = 6/449 (1%) Strand=Plus/Minus Query 18760 TAATCTAGCCTCATGCCAGCCACAACGGCGAGGCGCAAACAAGGATCGAAGCCATGACTA 18819 ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10278 TAATCTAACCACATGCCAGCCACAACGGCGAGGCGCAAACAAGGATCGAAGCCATGACTA 10219 Query 18820 CGTTCACCAGCATCGTTACCACTAACCCTGATTTCGGCGGATTCGAGTTCTACGTTGAAG 18879 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10218 CGTTCACCAGCATCGTTACCACTAACCCTGATTTCGGCGGATTCGAGTTCTACGTTGAAG 10159 Query 18880 CGGGACAGCAGTTCGACGATTCAGCATATGAAGAGGCATACGGTGTTAGCGTTCCTACCG 18939 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 10158 CGGGACAGCAGTTCGACGATTCAGCATATGAAGAGGCATACGGTGTTAGCGTTCCTTCCT 10099 Query 18940 CCGTGGTCGAGGAAATGAACGCTAAAGCGGCGCAGTTGAAAGACGGCGAGTGGCTTAATG 18999 |||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 10098 CCGTGGTCGAGGAAGTGAACGCGAAAGCGGCGCAGTTGAAAGTCGGCGAGTGGCTTAATG 10039 Query 19000 TCTCGCATGAAGCCTGACGCCTCTAACCACAATCCAGACCCGCGCTACCTGCGCGGGCTG 19059 ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| Sbjct 10038 TCTCGCATGAAGCCTGACGCCTCCAACCACAATCCAGACCCGCACTACCTGCGCGGGCTG 9979 Query 19060 CTCAAGAAAGCCGGTATCAGCCAGCGGCGCGCAGCCGAGCTGCTCGGCC--TCGGTGACA 19117 || | ||||| ||| |||||||||| | ||||||||| ||||||||| ||| | | Sbjct 9978 GTCGACAAAGCAGGTGTCAGCCAGCGTCAGGCAGCCGAGTTGCTCGGCCTGTCGTGGCCT 9919 Query 19118 GGGTGATGCGCTATTACCTGAGCGAGGACGTCA-AGGAGGGCTACCGTCCCGCGCCGTAT 19176 || | | ||| | |||||| |||| || |||| | || ||| || |||| || ||| Sbjct 9918 GGCT--TCCGCAACTACCTGCGCGACGA-GTCACACCAGCTCTATCGAGCCGCACCCTAT 9862 Query 19177 ACCGTCCAGTTCGCCCTGGAGTGCCTTGC 19205 || || || ||| | || || ||||| || Sbjct 9861 ACAGTTCAATTCTCTCTTGAATGCCTGGC 9833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119171589665272