Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027387.1 Length=38810 Score E Sequences producing significant alignments: (Bits) Value seq34826 96.9 9e-16 >seq34826 Length=13225 Score = 96.9 bits (106), Expect = 9e-16 Identities = 181/266 (68%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 36387 GTAGAGAAGTACGCTATGGATAAGGCGTATGGTATCTCCCATTCTGACCAGTTCACCAAC 36446 || ||||||||||| | || ||||||||||| ||| ||| || |||| ||||| Sbjct 5920 GTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCACGGCT 5861 Query 36447 AGTTCCATAATCGAAGAGAACATTGAGGGCTTAGCGGGTATCGAGAACAACTCATTCCTT 36506 || | | || ||| || | ||| | || || | ||||||||| | ||| Sbjct 5860 GACTCGCTGGTAGAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACTACCTC 5801 Query 36507 GAGGCACGCAACTTGTTCGATTCGGACTTATCCATCACTATGCCAGACGGACAGCAATTC 36566 || || || ||| | ||||| || || | || ||||| ||| ||||| |||| ||| Sbjct 5800 GAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCCGTTC 5741 Query 36567 TCAGTGAACGACCTGAGGGACTTCGATATGTTCCGCATCATGCCAGCGTATGACCGCCGT 36626 | ||||| ||||| | |||||| | || | || | | || ||| |||||| | Sbjct 5740 GCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCCGCAGTACGACCGCAGG 5681 Query 36627 GTCAATGGTGACATCTCCATCATGGG 36652 ||||| ||||||||| || ||||||| Sbjct 5680 GTCAACGGTGACATCGCCCTCATGGG 5655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123804851812704