Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027404.1 Length=167785 Score E Sequences producing significant alignments: (Bits) Value seq5 111 2e-19 >seq5 Length=869209 Score = 111 bits (122), Expect = 2e-19 Identities = 267/404 (66%), Gaps = 0/404 (0%) Strand=Plus/Minus Query 138884 CTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 138943 ||| || ||||| |||| ||| | | ||||| |||||||| || ||||||||||| Sbjct 711157 CTGCACGCCATAGTCCAGATGCCTTACCCGGTTCTCTTCTACACCGCGGTTATTTTTCAG 711098 Query 138944 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 139003 || || || ||| ||||||| |||||| | || || | || || || || || Sbjct 711097 TACCAGCAGCGATTCCACTTCCAGATGCCACAAGGGGTAGAACAGGGTGGCGGCACCACC 711038 Query 139004 ACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAAGGAAT 139063 ||| | || || || ||||| ||| || || ||||| ||||| || |||| || || Sbjct 711037 ACGCACACCGCCTTGCGAGCAGCTTTTTACTGCGGTCTGGAAATGCTTATAAAACGGGAT 710978 Query 139064 AACACCAGTATGGCGTACTTCACCCATGCCAATCTTAGAACCTTCGGCACGAATCATACC 139123 | |||||||| |||| || | | || |||| || ||||| || Sbjct 710977 ACAGCCAGTATGAAAGGCTTCGCCATTACGGATTGGGCTACCTAAAGCGCGAATACGGCC 710918 Query 139124 AACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAAGCGGAAGCCTT 139183 ||||||||||||| || ||||| | || | |||| ||||| | | ||| | Sbjct 710917 TGCGTTAATACCAATACCTGCGCGCTGCGACACGTATTTTACAATGGCACTGGAGGTGGC 710858 Query 139184 ATTGATAGACTTCAATGAATCTCCTGCCTCAATAACAACACATGAACTAAACTGTCGAGT 139243 |||||| || | || || || |||||| | || || || || ||||| || || Sbjct 710857 ATTGATCGAATCCAGGCTGTCACCACACTCAATCAGTACGCAGGAGCTGAACTGACGGGT 710798 Query 139244 CGGAGTACGACAACCAGCCATAATAGGAGTTGGTAATGAAATCT 139287 || ||||| || | ||||||||| || || | |||||||| Sbjct 710797 TGGGGTACGCACGCCCGACATAATAGGTGTCGGCAGTGAAATCT 710754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535574652487200