Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027984.1 Length=57677 Score E Sequences producing significant alignments: (Bits) Value seq11269 170 7e-38 >seq11269 Length=54388 Score = 170 bits (188), Expect = 7e-38 Identities = 293/429 (68%), Gaps = 36/429 (8%) Strand=Plus/Plus Query 5610 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCGAGACG 5669 ||| || || |||||||| || |||| ||| || || || || || ||||| ||||| || Sbjct 43124 TTCAACGATCCGCTCGGCCTCGTCCTGGTCGTATATGCCGGCGAACCCGAACGCGAGGCG 43183 Query 5670 GGCACACTGAATCATGGCTTTATGACGTAACATCCGTTTGGGATGCGACTGCCACGGCCC 5729 || ||||||||||| || || || || ||||| || || || ||||||||||| ||| Sbjct 43184 TGCGCACTGAATCATTGCCTTGTGGCGCAACATGCGCTTCGGGTGCGACTGCCATGGCT- 43242 Query 5730 CGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCACTC 5789 |||| ||| | || || || ||| |||| Sbjct 43243 --------------------GGGTGTTGC--GCTTA-------CACTCCGACATGTACTC 43273 Query 5790 GGTAACGCAGATCGGATGATTACGGTCCTTGCGGTAAATCCGGCATGTGCAG--GATTCA 5847 ||| | | | |||| || |||||||| || || | || ||||| ||| | | ||| Sbjct 43274 GGTGATGGTGGTCGGGTGCTTACGGTCTTTCCGATGGATTCGGCAGGTGTACTCGCTTCC 43333 Query 5848 TTGTCCTG----CTCAAAGTCCATGCCATCAAACTGCTGGTTTTCGTTGATGATGCGGGA 5903 | | | ||| || ||||||||||| |||||| ||| |||||||||||| || || Sbjct 43334 GTCAGCCGGCATCTCGAAATCCATGCCATCGAACTGCGGGTGTTCGTTGATGATCCGCGA 43393 Query 5904 CCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAAT 5963 |||||| || | ||| || ||||| || |||||||| | ||| || ||||||||||| | Sbjct 43394 CCAGCCGTCCAGGCCAACTACCGGCACAATGCCGTTGTTCTTGTCGGGGAAGGCGTACAA 43453 Query 5964 TTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAGCAATGCGATGAACTG 6023 ||||| || | || || || |||||||| ||| |||||||||| || | | ||| Sbjct 43454 CTCTTTGGTGAAGGGGTTCAGCTTGTACTGGTCGGCTACGATCAGCAGGGCAACCATCTG 43513 Query 6024 CGCATCGCT 6032 ||| || || Sbjct 43514 CGCGTCACT 43522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184050032333448