Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq103 163 3e-35 seq51 123 2e-23 >seq103 Length=407632 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 58112 GCGGGGCTGGTATTCAACCCGGCAACGCCGCTCAGTTATCTCGATTACGTCATGGACAAA 58171 || || ||||| ||||||||||| |||||||| | ||||||| ||||||||||||| Sbjct 272132 GCCGGCCTGGTGTTCAACCCGGCGACGCCGCTGCATCATCTCGACCACGTCATGGACAAG 272073 Query 58172 CTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGCCAGTCTTTTATTCCG 58231 | ||||| |||||||||||| |||||| || ||||||||||||||| || ||||| Sbjct 272072 GTCGATGTCATCCTGCTGATGAGCGTGAATCCGGGCTTCGGCGGCCAGAAGTTCATTCCC 272013 Query 58232 CAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGCATTGATGCGTCCGGTTACGACATT 58291 ||||| | || ||||||| | ||| ||||| | || ||||| |||||| Sbjct 272012 GGCACGCTCGCCAAGCTGCGCGCCGCGCGCGAACGCATCAAGGCATCCGGCCGCGACATC 271953 Query 58292 CGCCTGGAAGTGGACGGCGGCGTGAAGGTGAACAATATCGGCGAGATCGC 58341 |||||||| | |||||||| || ||| ||||||| |||||||||| Sbjct 271952 CGCCTGGAGATCGACGGCGGGGTCGGGGTCGGCAATATCCGCGAGATCGC 271903 >seq51 Length=473680 Score = 123 bits (136), Expect = 2e-23 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 58085 CAGCTGATTAAAGAACACGGCTGTAAAGCGGGGCTGGTATTCAACCCGGCAACGCCGCTC 58144 |||||||||||||| || || ||| | || || |||||||| |||||||| || ||||| Sbjct 310439 CAGCTGATTAAAGATCAGGGTTGTCAGGCTGGCCTGGTATTTAACCCGGCGACACCGCTA 310380 Query 58145 AGTTATCTCGATTACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCA 58204 |||||||| || || || |||| || | |||||||| |||||||||| |||||||| Sbjct 310379 AGTTATCTTGACTATGTGCTGGATAAGGTCGATGTGATTTTGCTGATGTCAGTGAACCCT 310320 Query 58205 GGCTTCGGCGGCCAGTCTTTTATTCCGCAGACGCTGGATAAACTGC 58250 || || || || || ||||||||| || | || ||||||| Sbjct 310319 GGTTTTGGGGGGCAAAAGTTTATTCCGGCAACTTTAGACAAACTGC 310274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470179916237280