Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq50 201 3e-47 seq11269 161 3e-35 seq34866 138 3e-28 seq4461 116 1e-21 seq164795 102 2e-17 seq14 87.8 5e-13 seq142399 84.2 6e-12 >seq50 Length=481860 Score = 201 bits (222), Expect = 3e-47 Identities = 201/261 (77%), Gaps = 0/261 (0%) Strand=Plus/Plus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258 ||| | ||||| ||| ||||||| ||||| |||||||| || ||||| || ||||| Sbjct 154692 GGCCAGGATCCGGAAGTCCGTTATATGCCGCAGGGCGGCGCCGTCGCTAACCTGAGCATT 154751 Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318 || || ||||||||||||| |||||| | |||||||| | |||||| ||||| |||||| Sbjct 154752 GCGACCTCTGAAAGCTGGAAAGATAAAGCTACCGGCGAAATGAAAGAGCAAACCGAATGG 154811 Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378 ||||| || || || | | |||||||||||||| ||||||| ||||| ||||| Sbjct 154812 CACCGGGTCGTAATTTACCAGCGTCTGGCAGAAATTGCCGGCGAATATCTGCGTAAAGGC 154871 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438 ||||||| || ||||||| ||| ||| ||||| |||||||| ||| ||||| Sbjct 154872 TCTAAGGTGTATATCGAAGGCAAGCTGAAAACCCGTAAGTGGCAGGATCAGCAAGGCGTA 154931 Query 41439 GATCGCTACACCACTGAAATC 41459 || || |||||||| |||||| Sbjct 154932 GAGCGTTACACCACCGAAATC 154952 >seq11269 Length=54388 Score = 161 bits (178), Expect = 3e-35 Identities = 280/407 (69%), Gaps = 0/407 (0%) Strand=Plus/Plus Query 33433 ACAGCAATGGCGAAGCCCAATGGCGTTGCGCTGCGGATGTTTGCACGCTCTGGACCAGGT 33492 ||||| ||||||||||| |||||| ||||||| ||||| || ||||| || ||| Sbjct 45368 ACAGCTATGGCGAAGCCTGTTGGCGTCTCGCTGCGAATGTTGGCGCGCTCATCGCCGGGT 45427 Query 33493 GGGCATTTATGGATTCTGTCATCTGGCGCGCCTAACGTTTCATCGCGGAACGCTTCCGGC 33552 | ||| | || || |||| || || ||||| | || | |||||| | | || ||| Sbjct 45428 GCGCAGGTGTGAATCCTGTTGTCCGGTGCGCCGAGCGAGTAGTCGCGGTAGGGATCAGGC 45487 Query 33553 ATAACGAAACCGCCACCAGTCCAAAGGCATGTTTTCTTTGTGTAATTGTCGTTTGCGCAA 33612 || ||||| || || || ||| ||||| || ||||| |||| ||||| | ||||| Sbjct 45488 ATGACGAAGCCTCCTCCGACCCATAGGCAGGTCTTCTTCTTGTAGTTGTCTTCGGCGCAG 45547 Query 33613 TATCCAGTAAAGTCAGCCGGGTTGAAAGCGTAGTCGGGTTTACGCCACAGGCTGCTAATC 33672 | || || | | || | ||| |||| ||| || ||||| | ||| || Sbjct 45548 AAGCCGGTGTATTGGAATGGATGGAAGGCGTGGTCAGGACGGCGCCAGAATGAGCTGATA 45607 Query 33673 TGGCTTACCGGGTTTTCAACGGCCCACGGCACACCGGCCATCTCGCCAATAATCTGGCAC 33732 ||||||| ||||| || || ||| | |||| | ||| ||||| | ||||||| Sbjct 45608 CGGCTTACTGGGTTCTCTGCGAACCATTTTCCGCCGGAAAGCTCTCCAATCACCTGGCAC 45667 Query 33733 TGCCACACAACGTGCATTGCTTTGAACTGGAAAGCCGGGTCAGCCTCACGTTTCGTGCTA 33792 ||||| || |||||||| || || | | | || || ||||||| || ||| | Sbjct 45668 TGCCAAACGACGTGCATGGCCTTCATTTCGTAAAGAGGATCAGCCTTGCGCTTCTCTTCA 45727 Query 33793 AACCAGCGAGCACCGCTTACCGCCAAATCAGTGCATGGAGGGAACCC 33839 |||||||| || |||||||| || | ||| ||||| || |||||||| Sbjct 45728 AACCAGCGCGCGCCGCTTACAGCAAGATCGGTGCAGGGGGGGAACCC 45774 >seq34866 Length=13211 Score = 138 bits (152), Expect = 3e-28 Identities = 181/251 (72%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 41170 TGAACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAA 41229 |||||||||| | |||| || |||||| | ||||||||| | ||||| ||||| | Sbjct 5939 TGAACAAAGTTATCTTGGTTGGTAATTTAGGCCAAGATCCAGAAGTACGTTATATGCCTA 5880 Query 41230 GCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCA 41289 ||| | || || ||| | ||||| || || || || |||||||| ||||||| || Sbjct 5879 ATGGCAATGGCGTAGCGAATATCAGCATTGCTACGACAGATAGCTGGAAAGATAAAAACA 5820 Query 41290 CCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAG 41349 | || | | | |||| | || ||||||||||| || || | || || || || |||| Sbjct 5819 CAGGGCAAATGCAAGAGCGTACTGAATGGCACCGTGTCGTGTTATTTGGCAAACTAGCAG 5760 Query 41350 AAATTGCTAGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAA 41409 || ||||| | |||||||| || |||||| | |||| ||| ||||| | | | || Sbjct 5759 AAGTTGCTGGTGAATACCTTCGTAAAGGTTCACAAGTGTACATCGAAGGTCGTTTACAAA 5700 Query 41410 CGCGTAAATGG 41420 ||||||||||| Sbjct 5699 CGCGTAAATGG 5689 >seq4461 Length=107335 Score = 116 bits (128), Expect = 1e-21 Identities = 182/260 (70%), Gaps = 3/260 (1%) Strand=Plus/Minus Query 41205 GATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACA 41264 ||||| ||| ||||||| |||| |||||||||||| || ||| | | | | || || Sbjct 84234 GATCCCGAAGTCCGTTATCTGCCGTCCGGCGGCGCGGTCGCCAATGTCACCGTGGCTACC 84175 Query 41265 ACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGC 41324 | || |||||| ||| || | ||||| | | | | || || ||||||||||| ||| Sbjct 84174 AGCGAGAGCTGGCGGGACAAGAATACCGGAGCCATGCAGGAGCAGACGGAATGGCATCGC 84115 Query 41325 GTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGTAGCAAG 41384 || || ||| |||| ||||| ||||| || | |||||||||||||| || |||| Sbjct 84114 GTGGTTTTCTACGGTCGCCTGGCGGAAATCGCCGGTGAATACCTGCGCAAGGGCTCCAAG 84055 Query 41385 GTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGAC---CAGGCTGGCGTTGAT 41441 | | | || ||| |||| || || || ||||||||| ||| | || || Sbjct 84054 ATTTATCTCGAGGGCTCGCTGCATACCCGCAAGTGGCAGGACAAGCAGACCGGGCAGGAC 83995 Query 41442 CGCTACACCACTGAAATCAA 41461 ||||||| ||| || ||||| Sbjct 83994 CGCTACAGCACCGAGATCAA 83975 >seq164795 Length=1075 Score = 102 bits (112), Expect = 2e-17 Identities = 192/282 (68%), Gaps = 3/282 (1%) Strand=Plus/Minus Query 41190 GGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAAT 41249 |||| || ||| | || || |||| || ||| |||| |||||| ||||| | || Sbjct 616 GGCACCTGCGGCCAGGACCCGGAAACACGCTACCTGCCCAGCGGCAATGCGGTCACCAAC 557 Query 41250 CTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAA 41309 || ||| | ||||| | || |||| || || ||||| ||||| || | Sbjct 556 CTGAGCCTGGCCACCAGCGAGCAGTGGACCGACAAGCAGACCGGTCAGAAGGTCGAGAAG 497 Query 41310 ACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTG 41369 || || ||||||||||||| | | ||||| ||| | || || || || ||||||||||| Sbjct 496 ACCGAGTGGCACCGCGTTGCCCTGTTCGGCAAGGTCGCCGAGATCGCCGGCGAATACCTG 437 Query 41370 CGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAG 41429 ||||| ||| |||||| ||| || |||| |||| || || | || ||| || Sbjct 436 CGCAAGGGTTCGCAGGTGTACATCGAGGGCAAGCTGCAGACCCGCGAGTG---GGAAAAG 380 Query 41430 GCTGGCGTTGATCGCTACACCACTGAAATCAACGTGGGCATG 41471 | || | | || |||||||| ||||||| ||| | |||| Sbjct 379 GACGGTATCAAGCGTTACACCACCGAAATCATCGTCGACATG 338 >seq14 Length=669857 Score = 87.8 bits (96), Expect = 5e-13 Identities = 210/309 (68%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 41157 ATGGCCGGTTCACTGAACAAAGTAGAAATCATTGGCAACTTAGGCAACGATCCAGAAATC 41216 ||||| ||||| | ||||| || ||| | |||||| | ||| |||||| || | Sbjct 425652 ATGGCGGGTTCGGTCAACAAGGTCATCATCGTGGGCAACCTCGGCCGCGATCCCGAGGTG 425593 Query 41217 CGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGG 41276 || | | | | ||||||| ||| | || || |||||||||| | |||| |||| Sbjct 425592 CGCAGCTTCCAGAACGGCGGCAAGGTGGTGAACCTGCGCATCGCCACCTCGGAAACCTGG 425533 Query 41277 AAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTC 41336 || | | | |||||| || |||| || |||||||| || | ||| ||| Sbjct 425532 CGCGACCGGAACTCGGGCGAGCGCAAGGAACGCACCGAATGGCATTCGGTCGCCATTTTC 425473 Query 41337 GGTAAGC---TGGCAGAAATTGCT-AGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCAT 41392 | ||| |||| | || || ||| |||| |||||||| || |||||||| | || Sbjct 425472 AGCGAGCCGCTGGCCAAGATCGCCGAGC-AATATCTGCGCAAGGGCAGCAAGGTCTATAT 425414 Query 41393 TGAAGGC-AGCCTGCGAACGCGTAAATGGCAGGACCAG-GCTGGCGTTGATCGCTACACC 41450 || ||| ||| || ||| || ||||||||||| ||| || ||| |||||||| || Sbjct 425413 CGAGGGCCAGCTTGA-AACCCGCAAATGGCAGGATCAGAGCGGGC-AGGATCGCTATACG 425356 Query 41451 ACTGAAATC 41459 || |||||| Sbjct 425355 ACCGAAATC 425347 >seq142399 Length=1225 Score = 84.2 bits (92), Expect = 6e-12 Identities = 108/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 7342 CTTGAACGCAGAGCGCATCTCTGCCATCGCCTGGCCTGCCTGGTCAGCGGTGATGTCGAA 7401 ||| || ||| |||||||||| ||| ||||| ||||||| || || | | ||||| Sbjct 1073 CTTAAATGCAACACGCATCTCTGACATTGCCTGTCCTGCCTCCTCGGCAGATACATCGAA 1132 Query 7402 CGCCACGCCCATCTTGATGGCTGATTCCGCAAACGTCATCAGTTCTTTGGCT--GCAATG 7459 ||||| |||||||||||||| || ||||| || || || | ||| |||||| Sbjct 1133 TGCCACACCCATCTTGATGGCATCTTGAGCAAATGTAGACAACTCAT--GCTTGGCAATG 1190 Query 7460 CCAGACTGACCACCCGCGGCAACGATC 7486 || |||||||| || || |||| |||| Sbjct 1191 CCTGACTGACCGCCTGCTGCAAAGATC 1217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132924491160096