Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq57698 138 1e-27 seq1973 129 7e-25 seq68 102 9e-17 seq51 95.1 1e-14 >seq57698 Length=6283 Score = 138 bits (152), Expect = 1e-27 Identities = 263/380 (69%), Gaps = 28/380 (7%) Strand=Plus/Minus Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582 ||| ||||| |||||||||||||| | || | |||||| | ||| ||||| || ||||| Sbjct 5068 ACGGTCAAAACGACCTGGACGAAGTAATGCTTTATCAAGAACATCTACGCGGTTAGTCGC 5009 Query 9583 GGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTG 9639 || || || | || ||| ||||| ||||||||||||||||| | | ||| Sbjct 5008 AGCAATAACGATAACGCCT---TCATTGCCTTCAAAACCATCCATCTCAACAAGCATTTG 4952 Query 9640 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCA-CTG-----CGTTG 9693 ||| | ||||| || || ||||||| | |||||||| | ||| || || Sbjct 4951 GTTTAAGGTTTGCTCACGCTCATCAT------GACCACCACCAGTACCTGAACCACGATG 4898 Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGG---TTGA-TTTTCGCGAG 9749 || || ||||||||||||||||| |||| ||| || || ||| |||||| | Sbjct 4897 ACGACCAACAGCATCAATCTCATCAATAAAGATGATACAAGGCGCATGACGTTTCGCTTG 4838 Query 9750 CGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGT 9809 |||||| | ||| || |||||| || || |||||||| ||||| || ||||||| Sbjct 4837 ----TTCAAACATATCACGAACACGCGATGCACCTACACCAACGAACATTTCGACAAAGT 4782 Query 9810 TTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGA 9868 | | || | | | || ||| || || |||| |||||| ||||| ||| || | Sbjct 4781 CAGAACCAGAGATACT-GAAGAAAGGTACTTTAGCTTCACCAGCAATTGCTTTTGCTAAT 4723 Query 9869 AGAGTCTTACCCGTACCTGG 9888 | || ||||| |||||||| Sbjct 4722 AATGTTTTACCTGTACCTGG 4703 >seq1973 Length=162522 Score = 129 bits (142), Expect = 7e-25 Identities = 335/505 (66%), Gaps = 18/505 (4%) Strand=Plus/Plus Query 9523 ACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGC 9582 ||| ||||| |||||||||||||| | || | ||| | | ||| || || || || || Sbjct 27188 ACGGTCAAAACGACCTGGACGAAGTAAAGCTTTATCCAATACATCTACACGGTTTGTGGC 27247 Query 9583 GGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAGTTG 9639 || || || | | |||| ||||| || ||||| ||||||||| | | ||| Sbjct 27248 AGCAATTACGATCACACCT---TCATTGCCTTCGAAACCGTCCATCTCTACAAGCATTTG 27304 Query 9640 GTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACC---ACCAGCACTGCGTTGCTT 9696 ||| | |||||||| |||||||||| | || ||| ||| | || || || Sbjct 27305 GTTCAAGGTTTGTTCACGTTCATCATGACC--GCC-ACCTGTACCTGAACCACGATGACG 27361 Query 9697 TCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTTCGCGAGCGAC 9753 || || |||||||||||||||||||| | ||| |||||| ||| || ||| Sbjct 27362 ACCTACAGCATCAATCTCATCAATGAAAATGATACATGGTGCATGACGTT---TAGCTTG 27418 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813 ||| || | ||| || ||||| || || |||||||||||||| || || || | | Sbjct 27419 TTCGAACATATCACGAACACGAGAAGCACCAACACCAACAAACATTTCAACGAAATCAGA 27478 Query 9814 GGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9873 | ||| | ||| || || |||| |||||| ||||| ||| ||| | | || Sbjct 27479 ACCAGAAATACTAAAGAAAGGAACTTTAGCTTCACCAGCAATTGCTTTGGCTAATAATGT 27538 Query 9874 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTCC 9933 |||||||||||||| ||| | | | |||| |||||||| | || ||| | Sbjct 27539 TTTACCCGTACCTGGAGGACCAACCATTAACACACCACGTGGAATAGTTGCACCAAGACG 27598 Query 9934 AAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGGCGGC 9993 | || | | || | || | ||||| |||||||| | | ||| | ||| || | Sbjct 27599 TTTGAATTTTGCTGGATCTTTTAAGAAATCGACAATTTCAACGACTTCTTGTTTTGCTTC 27658 Query 9994 GTCAATCCCCTCAACATCGGTAAAC 10018 |||| || ||||||| |||||| Sbjct 27659 GTCACAACCTGCAACATCAGTAAAC 27683 >seq68 Length=444459 Score = 102 bits (112), Expect = 9e-17 Identities = 364/553 (66%), Gaps = 22/553 (4%) Strand=Plus/Plus Query 9461 CGCGCGTGAACACCCAAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATC 9520 || ||||| || || |||||||||||| ||| | ||| | || |||||| Sbjct 24859 CGGGCGTGCACGGTCAGGATCTTCTCGCGGCCCTTGATGTCGGGGTTCGGCACATGGATC 24918 Query 9521 TTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTC 9580 | || || ||||| || || || || ||||| || || | ||| || || ||| Sbjct 24919 TGGCGGTCGAAGCGGCCGGGGCGCAGCAGCGCCGGGTCCAGCACATCCTTACGGTTGGTC 24978 Query 9581 GCGGCGATGACAACAATACCTGTTTCATT---ATCAAAACCATCCATCTCTGTCAAAAGT 9637 || |||| || | | ||| |||||| || || || |||||||| || ||| Sbjct 24979 GCCGCGACGATGATCACACC---TTCATTTGCCTCGAACCCGTCCATCTCGACCAGAAGC 25035 Query 9638 TGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGC-ATACCACCAGCACTGCGTTGC 9694 ||||| | || ||||| ||||| ||||| ||| | | |||| ||| | | ||| Sbjct 25036 TGGTTCAGTGTCTGTTCGCGTTCGTCATTGCCGCCGCCGATAC--CCA-CGCCGCGCGCA 25092 Query 9695 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATT-TTCGCGAGCGAC 9753 |||||||| || ||||| || || || |||||||| || ||| ||| | || Sbjct 25093 CGGCCCACGGCGTCGATCTCGTCGATAAACACGATGCAAGGCGCATTCTTCTTG-GCCTG 25151 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813 ||| || | || || ||||| || || || ||||| ||||| ||||| |||| | Sbjct 25152 TTCGAACATGTCGCGCACACGGGATGCACCGACCCCAACGAACATTTCCACGAAGTCGGA 25211 Query 9814 GGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872 | | | || | || ||| || || | |||||||| ||||| || ||||| || | Sbjct 25212 ACCCG-AGATGGTGAAGAACGGCACGCCCGCCTCACCCGCGATGGCGCGCGCGAGCAGGG 25270 Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC---AC 9929 | |||||||| || || ||| | || || |||||| || |||||| |||| || Sbjct 25271 TTTTACCCGTGCCGGGGGGACCGACCAGCAGCGCACCTTTGGGGATCTTGCCGCCGAGAC 25330 Query 9930 TTCCAAAGTATCTCTCAGGTTGCTTAAGAAAATCCACAATTTCTTCCAATTCATCTTTGG 9989 | ||| ||| | |||||| || || || || || ||||||| || || |||| Sbjct 25331 -GCGAAAACTTCT-GCGGGTTGC-GCAGGAATTCGACGATCTCTTCCAGCTCTTCCTTGG 25387 Query 9990 CGGCGTCAATCCC 10002 | |||| || || Sbjct 25388 CCTCGTCGATGCC 25400 >seq51 Length=473680 Score = 95.1 bits (104), Expect = 1e-14 Identities = 255/382 (67%), Gaps = 20/382 (5%) Strand=Plus/Plus Query 9517 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9576 || || ||| || |||||||||||||| | | || |||| | | ||| || || Sbjct 102601 GACCTGACGGTCGAAGCGACCTGGACGTAATAAGGCAGCATCCAATACATCCGGACGGTT 102660 Query 9577 CGTCGCGGCGATGACAACAATACCTGTTTCATT---ATCAAAACCATCCATCTCTGTCAA 9633 || |||||||| | || |||||| |||||| ||| || || |||||||| || Sbjct 102661 GGTGGCGGCGATAATAATAATACC---TTCATTACCATCGAAGCCGTCCATCTCAACCAG 102717 Query 9634 AAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA--TACCACCAGCACTGCGT 9691 | ||||| | ||||| || || |||||| | || || || ||| || | || Sbjct 102718 CATCTGGTTTAAGGTTTGCTCACGCTCATCA-TGGCCACCACCTA-AACCGGCGCCACGC 102775 Query 9692 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGT----TGATTTTCGCG 9747 ||| || ||||| ||||||||||| || |||| ||||| ||| |||| || Sbjct 102776 TGCCGGCCTACGGCGTCAATCTCATCGATAAAGATAATGCAAGGTGCCGCTTTTTTGGCT 102835 Query 9748 AGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 9807 || || || | || || || ||| ||| || ||||| |||||||| || ||||| Sbjct 102836 TGC----TCGAACATGTCGCGCACCCGCGAGGCACCGACACCGACAAACATTTCAACAAA 102891 Query 9808 GTTTGCGGCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGA 9866 | || |||| | | | | || || || || | |||||| ||||| || ||| | Sbjct 102892 ATCTGAACCGGAGATAGT-AAAAAACGGTACCTTGGCTTCACCGGCAATCGCCTTGGCTA 102950 Query 9867 GAAGAGTCTTACCCGTACCTGG 9888 | ||| ||||| |||||||| Sbjct 102951 ACAAAGTTTTACCGGTACCTGG 102972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581946742580640