Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq68 113 5e-20 >seq68 Length=444459 Score = 113 bits (124), Expect = 5e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 53828 TCGACTCGATGGGGAACGATGCGGCGATCGTCCAGGCCGCCCGCGTTTCTTACGGGGCCG 53887 |||||| ||||| ||||||| || ||||| |||||||| ||||| || || || | Sbjct 65857 TCGACTATATGGGCGACGATGCCGCCATCGTGCAGGCCGCGCGCGTCAGCTATGGCGCTG 65916 Query 53888 GAACCAAGTCGGTCAGCGACGATCGGGCTCTGATCCGCTATCTCATGCGCCACAAGCACA 53947 | ||| | ||| | |||||| | | ||||||||||| || ||||| ||| |||| Sbjct 65917 GCACCCGGAAGGTGAACGACGACAGCGGCCTGATCCGCTACCTGATGCGGCACTGGCACT 65976 Query 53948 CGACGCCGTTTGAGATGGTCGAATTCAAGTTTCACGTGCGCGCGCCCATCTACGTGGCGC 54007 |||| ||||| |||||| ||| ||||| | ||||| ||| |||| ||| |||| Sbjct 65977 CGACCCCGTTCGAGATGTGCGAGGTCAAGCTGCACGTCAAACTGCCGATCTTCGTCGCGC 66036 Query 54008 GTCAGTGGCTCCGTCACCGGACTGC 54032 | |||||| || | || || || || Sbjct 66037 GCCAGTGGATCAGGCATCGCACCGC 66061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547289001051840