Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq23155 91.5 2e-13 >seq23155 Length=22375 Score = 91.5 bits (100), Expect = 2e-13 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 89161 CCGATTCAGACGAATGGTTTACATGGAAAGAATTATTCGATCCTGTCTTGCATATAGAAC 89220 ||||| ||| ||||||| | ||||| || | | ||||| || || || || | Sbjct 9469 CCGATGAAGATGAATGGTCTTGCTGGAAGGAGATGTCTGATCCCGTTTTACACATCCAGT 9410 Query 89221 TTAGGAGGTGGGCTGATATATTTATTATCGCGCCACTAACGGCTAATACTCTAGCGAAGA 89280 | | | ||||||||| || || || || || || || ||||| |||| || | Sbjct 9409 TACGTCGCTGGGCTGATGCGTTAATCATTGCACCTCTTGATGCCAATACATTAGCCAAAA 9350 Query 89281 TAGCTAATGGTATATGCGACAACTTACTAACTTCTATAGTTAGGGCATGGGATA-TATCA 89339 | || ||||||||||| ||||| |||| || | | | || |||| ||||||| || | Sbjct 9349 TGGCAAATGGTATATGTGACAATCTACTGACATGCACAATTCGGGCCTGGGATAGAATGA 9290 Query 89340 AAGCCCCTTATTTTT-TGTCCTGCCATGAATACTCTAATGTGGGAACATCC 89389 || || |||||||| ||||| || |||||||| |||||||| ||||| Sbjct 9289 AA--CCATTATTTTTCTGTCCAGCTATGAATACATATATGTGGGATCATCC 9241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601821863816640