Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028655.1 Length=39235 Score E Sequences producing significant alignments: (Bits) Value seq34826 125 2e-24 >seq34826 Length=13225 Score = 125 bits (138), Expect = 2e-24 Identities = 200/283 (71%), Gaps = 8/283 (3%) Strand=Plus/Minus Query 31789 GTCCAGAAGCACGCGATGGATAAGGCTTATGGTATCAGTCACACAGACCAGTTCAACGCT 31848 ||| ||||| |||| | || ||||| ||||| ||||| ||| | |||| |||| ||| Sbjct 5920 GTCGAGAAGTACGCCAACGACAAGGCGTATGGCATCAGCCACTCCGACCGCTTCACGGCT 5861 Query 31849 ---TCGTTTGTCATTGATGACAACATTACTGGTCTGGTTGGGATTGAGAACAACTCATTC 31905 ||| | || || || || | | | || || | ||||||||| | | Sbjct 5860 GACTCGCTGGTA---GAGGAGCACCTGAAGGACGGGGCAGGCCTGGAGAACAACGACTAC 5804 Query 31906 CTTGAAGCTCGTAACATGTTCGACTCAGACATGGCGACTACCTTACCGGATGGCTCTACG 31965 || |||||||||||| | |||||||| || ||| ||| ||| || || ||| || Sbjct 5803 CTCGAAGCTCGTAACCTCTTCGACTCCGATATGTCGATCACCGCGCCTGACGGCCAGCCG 5744 Query 31966 TTCTCAGTGAACGACCTCCGCGACTTCGACATGTTCCGCATCATGCCTGCA-TATGACCG 32024 ||| | ||||| |||||||| |||||| || || | || | | || ||| || ||||| Sbjct 5743 TTCGCTGTGAATGACCTCCGAGACTTCAACCTGCTTCGGGTGGTCCC-GCAGTACGACCG 5685 Query 32025 CCGCATCAACGGTGACATCGCTATCATGGGTGGCACAGGGAAG 32067 | | |||||||||||||||| ||||||||||||| |||||| Sbjct 5684 CAGGGTCAACGGTGACATCGCCCTCATGGGTGGCACCGGGAAG 5642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 125161941001304