Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq128 150 7e-32 >seq128 Length=380166 Score = 150 bits (166), Expect = 7e-32 Identities = 248/355 (70%), Gaps = 2/355 (1%) Strand=Plus/Plus Query 18914 GCTGGTCTATGCTGGCGACACTGGCG-AAAAGTGGGGCTACTTCGACGCTCCACTGCTGG 18972 |||| ||||||||||||| || ||| |||||| |||| | || ||| || | | Sbjct 107589 GCTGATCTATGCTGGCGATACAGGCTCAAAAGTCGGGC-ATTTTAACGAAGTTCTATTAG 107647 Query 18973 CCGGGCTAGGTGTTGATGTGGATTCACACGGTAAAATGCCAGATGTGGTGCTACATTTTA 19032 | | |||||| || | | ||||||||| ||||||||||| || | ||||| Sbjct 107648 CAGAGCTAGGAGTAACAATCAACAAACACGGTAAGATGCCAGATGTCGTTTTGTATTTTT 107707 Query 19033 CTGCGAAAAACTGGCTGCTACTGGTTGAGTCTGTCACCAGTCATGGACCGGTTGATGGGA 19092 ||| ||| | ||| | | || |||| || || ||||||||||| || || ||||| | Sbjct 107708 CTGAAAAAGATTGGTTAATTCTTATTGAATCAGTTACCAGTCATGGTCCTGTAGATGGCA 107767 Query 19093 AGCGGCATGCTGAGCTTGCCAKGCTGTTTGCCGGATCAACAGCCGGACTTGTCTATGTGA 19152 | || |||| ||||| ||| | | ||||| ||| | || || | || ||||| | Sbjct 107768 AACGTCATGAGGAGCTGGCCCAGTTATTTGCAAACTCATCTGCTGGTTTAGTGTATGTCA 107827 Query 19153 CCGCTTTTCCAAATCGCTCCATCATGGGGCGATATCTTGGTGAAATCGCATGGGAAACAG 19212 | || ||||| | || |||| ||| || |||| | ||||| || || |||||||| | Sbjct 107828 CAGCCTTTCCTGACCGTGCCATTATGCGGAAATATTTAGGTGATATTGCTTGGGAAACTG 107887 Query 19213 AGGTATGGGTGGCTGATGCACCTTCTCATCTTATTCACTTCAACGGAGTGCGATT 19267 | || ||||| || ||||| ||| |||| | ||||| || || ||||| |||| Sbjct 107888 AAGTCTGGGTTGCGGATGCCCCTACTCACTTAATTCATTTTAATGGAGTTAGATT 107942 Lambda K H 0.635 0.409 0.915 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194772633498904