Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_028661.1 Length=41149 Score E Sequences producing significant alignments: (Bits) Value seq34826 158 3e-34 >seq34826 Length=13225 Score = 158 bits (174), Expect = 3e-34 Identities = 185/246 (75%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 31187 TACGACTACCTGCACAAGAAGATCTTCAACGAGTCTTCTTTCAACCCAACCGCAAAGAGC 31246 |||||| |||||||||| | ||||||| || || || |||||||| | || |||| Sbjct 8071 TACGACCTCCTGCACAAGCAACTCTTCAAGGAATCCTCGTTCAACCCTAAAGCCGTGAGC 8012 Query 31247 CCTACGGGGCCACGCGGTCTGGGGCAGTTCACCAAGGCCACCGGCAGCGCTTACGGTCTG 31306 ||||||||||| |||||| | |||||||||||||||||||| || | || ||||| ||| Sbjct 8011 CCTACGGGGCCTCGCGGTATCGGGCAGTTCACCAAGGCCACTGGGAAAGCCTACGGCCTG 7952 Query 31307 ATCACCGATGAGGACTTCATGGACCCCCGGAAGTCGATCAATGCGTCTGCCGCTCTG--- 31363 |||||||| ||||||||| | |||||| ||||| ||| | | | ||||||| | Sbjct 7951 ATCACCGAGGAGGACTTCTTCGACCCCGCCAAGTCCATCGACG---CAGCCGCTCGGCAC 7895 Query 31364 ACCCGTGACCTTTTGGGGACCTACAAGGGCGACTATCTGAAGGCCGCT-CTGGCGTACAA 31422 | || ||| | | | | ||| |||||| | ||||||| |||| ||| |||||| Sbjct 7894 ATGCGCGACAACCTCAAGGCGTCCAACGGCGACGAGCTGAAGG-CGCTCCTGATGTACAA 7836 Query 31423 CCAAGG 31428 |||||| Sbjct 7835 CCAAGG 7830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131273632076552